Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1936 |
Symbol | gltD |
ID | 5670337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2323968 |
End bp | 2325413 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641240857 |
Product | glutamate synthase subunit beta |
Protein accession | YP_001506279 |
Protein GI | 158313771 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.336215 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.23616 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACC CGACCGGCTT TCTCAAGCAC CGCCGGGAGC TGCCCACGCG CCGACCGGTG GACGTGCGCA TCACCGACTG GCGCGAGGTG TACGAGTCGT TCCCGGAGCC GGCGCTGCGT GACCAGGCGG GCCGGTGCAT GGACTGCGGC ATCCCGTTCT GCCACGAGGG CTGCCCGCTC GGGAACATCA TTCCCGAGTG GAACGACCTC GCCCGCCGCT CGGACTGGTC CGAGGCGATC GAACGGCTGC ACGCGACGAA CAACTTCCCG GAGTTCACCG GGCGGCTGTG CCCCGCGCCG TGCGAGGCGG CCTGCGTGCT GGGCATCGGG GACGACCCGG TGACCATCAA GCAGATCGAG GTCACCATCA TCAACCGTGC CATCTCGGAC GGGTCGGTCG TGCCGGTGCC GCCGTCGGTG CGCACGGGCC GCCGCGTCGC GGTCGTCGGC TCGGGCCCGG CCGGCCTCGC CGCCGCCCAG CAGCTCACCC GGGCCGGCCA CGAGGTGGTC GTCTACGAGC GGGCCGACCG CGCCGGCGGC CTGCTCCGCT ACGGCATCCC CGAGTTCAAG ATGGAGAAGC GGGTCCTCGA CAACCGTCTG GCCCAGATGG AGGCCGAGGG GACGTCGTTC GTCACCTCGT GCAACGTGGG CGTCGACATC ACCGCCGACG AGCTGCGTTC GTCCTACGAC GCGGTCGTCC TGGCCGGCGG GTCGACGGTG GGGCGTGACC TTCCCGTCCC CGGGCGGGAG CTGCGGGGCA TCCACCTGGC CATGGAGTTC CTGGTCCCGG CGAACCGGGT GCAGCAGGGG GACCTGGCCG AGACGACGAT CTCCGCTGCC GGCAAGCGGG TCGTGATCAT CGGCGGTGGC GACACCGGGG CGGACTGCCT GGGCACCTCG CACCGGCAGG GCGCGCTGTC CGTCCACCAG CTCGAGATCA TGCCGAGGCC GCCCGCCTCC CGGCCGCCGG CGAATCCGTG GCCGTCCTTC CCGATCGTCT ACCGGGTGTC CAGTGCGCAC GAGGAGGGCG GCGAGCGGGT CTTCGCCGTC TCCACCGAGC GCTTCGTCGG CGATGACGAG GGCAACGTGC GGGCCCTGCT CATGCACGAG GTCCAGATGG TCGACGGGCG CTTCCAGAAG ATCGAGGGCA GCGAGACCGA GCTGCCGTGC GACCTGGTGC TGCTGGCGAT GGGCTTCGTC GGCCCGGAGC GCCCCGGCCT GCTCGAGCAG CTCGGCGTCG ACCTGGACGC CCGCGGCAAC GTCGCCCGCG ATCTTGGTTG GTCGACGTCG GTGCCCGGCG TGTTCGTGGC CGGTGACATG GGCCGTGGCC AGTCCCTGAT CGTCTGGGCC ATCGCGGAGG GGCGCTCGGC GGCCGCCGCC GTCGACCGGC ACCTGATGGG GACGACAGAC CTGCCGGCTC CGATCCTGCC GACCCGCCGG CCCTGA
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Protein sequence | MADPTGFLKH RRELPTRRPV DVRITDWREV YESFPEPALR DQAGRCMDCG IPFCHEGCPL GNIIPEWNDL ARRSDWSEAI ERLHATNNFP EFTGRLCPAP CEAACVLGIG DDPVTIKQIE VTIINRAISD GSVVPVPPSV RTGRRVAVVG SGPAGLAAAQ QLTRAGHEVV VYERADRAGG LLRYGIPEFK MEKRVLDNRL AQMEAEGTSF VTSCNVGVDI TADELRSSYD AVVLAGGSTV GRDLPVPGRE LRGIHLAMEF LVPANRVQQG DLAETTISAA GKRVVIIGGG DTGADCLGTS HRQGALSVHQ LEIMPRPPAS RPPANPWPSF PIVYRVSSAH EEGGERVFAV STERFVGDDE GNVRALLMHE VQMVDGRFQK IEGSETELPC DLVLLAMGFV GPERPGLLEQ LGVDLDARGN VARDLGWSTS VPGVFVAGDM GRGQSLIVWA IAEGRSAAAA VDRHLMGTTD LPAPILPTRR P
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