Gene Franean1_1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1854 
Symbol 
ID5670256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2225439 
End bp2225855 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content71% 
IMG OID641240775 
ProductCoA-binding domain-containing protein 
Protein accessionYP_001506198 
Protein GI158313690 
COG category[R] General function prediction only 
COG ID[COG1832] Predicted CoA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0446458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0146672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAGA ACACGGATGC GGTCAAGCGC AGGGTCCTCA CCGACACCGA GGTCTGGGCG 
GTTGTCGGGC TGTCCGAGAA CACCTCGCGC GCGGCCTATG GCGTTGCCGA GTACCTGCGC
AGGCACGGGA AGCGGACGAT ACCGGTGCAC CCGTCGGCGC CGGTGGTCGC CGGCGAGCAG
GGGTACGCGA CGCTCAGCGA GATCCCGTTC CCGGTGGACG TGGTGGATCT CTTCGTCCGT
TCCGACCTGG TCGGCGAGGT CATCGACGAG GCGGTGAAGA TCGGCGCCGG TGCCGTCTGG
ACGCAGCTGG ACGTCCGGGA CGAGGCCGCG CAGGCACGCG CCCGTGACGC CGGGCTCGAC
GTGGTCGTGG ACGCCTGCCC CCGCATCGAC GGGCCCCGTC TGCTGGGCTG GCACTAG
 
Protein sequence
MTENTDAVKR RVLTDTEVWA VVGLSENTSR AAYGVAEYLR RHGKRTIPVH PSAPVVAGEQ 
GYATLSEIPF PVDVVDLFVR SDLVGEVIDE AVKIGAGAVW TQLDVRDEAA QARARDAGLD
VVVDACPRID GPRLLGWH