Gene Franean1_1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1792 
Symbol 
ID5670194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2155849 
End bp2156343 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content74% 
IMG OID641240713 
Producthypothetical protein 
Protein accessionYP_001506136 
Protein GI158313628 
COG category 
COG ID 
TIGRFAM ID[TIGR00026] deazaflavin-dependent nitroreductase family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCA GCAGCGCGAA CCCGACCGGC AACACCCGGG CCGACGACGC CCGGCACTAC 
CGGCGGCCCA ACTGGTTCAC CAACACGTTC CTCAACCGCC CGGTCGCGCT GGTCACCCGG
GCCGGGCTGA GCCTGTGGGG GAGCCGGGTG CTCGAGGTCC GCGGCCGCAC GTCCGGCGAG
ACCCGGCGGT TGCCGGTGAA CCTGCTCACG CTGGAGGGAC GGCAGTACCT GGTCTCCGCG
CGCGGGCACA GCCAGTGGGT CCGCAACGTG CGGGCCGCCG ACGGCGAGCT GGCGCTCGTC
GTGGGGCGCC GGCGGGTCCG CTACCGTGCG GCCGAGCTCG CCGGCGATGA GAAGATCCCG
GTGCTGCGGG CGTACCTGAA GAAGTGGAAG GCGGAGGTCG GCGTGTTCTT CGACGGCGTG
GGCCCGGAGT CGGCCGACGA GGAGCTGGGC CGGATCGCGC CGCGGCACCC GGTCTTCATC
CTCGCCGCCG CCTGA
 
Protein sequence
MASSSANPTG NTRADDARHY RRPNWFTNTF LNRPVALVTR AGLSLWGSRV LEVRGRTSGE 
TRRLPVNLLT LEGRQYLVSA RGHSQWVRNV RAADGELALV VGRRRVRYRA AELAGDEKIP
VLRAYLKKWK AEVGVFFDGV GPESADEELG RIAPRHPVFI LAAA