| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1778 |
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| Symbol | |
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| ID | 5670180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2135861 |
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| End bp | 2136772 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641240699 |
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| Product | hypothetical protein |
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| Protein accession | YP_001506122 |
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| Protein GI | 158313614 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
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| TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00178055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.185841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTCG CCGTCACCGG CTCGTCCGGG CTGATCGGTT CGGCGTTGCT GCCCGCGCTG
CGCGGGGACG GCCACGAGGT CGTCACCCTC GTCCGGCGCC CGCCGCGCGC CCCGTCCGAG
ATCCGCTGGG ACCCGGCGGC CGGCACGCTG GACGCCGCCG CCCTGGCCGG CGTGGACGGC
GTCGTGAACC TGGCCGGCGC CGGCATCGGC GACCGCCGGT GGACCGCCGC CTACAAGCAG
ACCCTTCGGA CCAGCCGCAT CGACGGCACC CGCCTGCTCG CCGAGGCCCT CGCCGGCCTC
GACCCGCGCC CGCGGGTCCT GCTCTCCGGC AGCGCCATCG GCTGGTACGG CACGAACGCC
GGCTCGGCCG GCGCCGCGCT GGACGAGACG GCCCCGCCCG GCACCGGCTT CCTCGCCGAG
CTCGCCCGTG ACTGGGAGAA CGCGACCACA GCGGCGCAGG AGGCCGGCAT CCGGGTCGTC
CGGGTGCGCA CCGGCATCGT CCTCTCCGGG CGCGGTGGGA CCCTCCAACG GCTGCTCCCG
ATCTTCCGGC GCGGAGCCGG CGGCCGGCTG GGCTCGGGGC GCCAGTGGCT GAGCTGGATC
AGCCTGGCCG ACACCGTCGA CGCGCTGTGC TTCCTCCTCG AGGCCGACGG AGTACGCGGG
CCGGTCAACC TGGTGGCGCC CACCCCGGTG ACGAACGCGG AGTTCACGTC GGCGCTGGCG
CGGACGCTAC GGCGCCCGGC CTTCGCCCAG GTACCGCGCT TCGCACTACG CCTGGCCCTG
GGCGAGTTCG CCGACGAGGG ACCACTCGCC TCCCAGCGGC TCGCGCCGGC CACGCTGGTC
GACGCCGGGT TCCGGTTCAA CCACTCCGAC CTCGCCACCG CGCTGGCCGA CGCCGTCCAC
CGCGACGCCT GA
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| Protein sequence | MKVAVTGSSG LIGSALLPAL RGDGHEVVTL VRRPPRAPSE IRWDPAAGTL DAAALAGVDG
VVNLAGAGIG DRRWTAAYKQ TLRTSRIDGT RLLAEALAGL DPRPRVLLSG SAIGWYGTNA
GSAGAALDET APPGTGFLAE LARDWENATT AAQEAGIRVV RVRTGIVLSG RGGTLQRLLP
IFRRGAGGRL GSGRQWLSWI SLADTVDALC FLLEADGVRG PVNLVAPTPV TNAEFTSALA
RTLRRPAFAQ VPRFALRLAL GEFADEGPLA SQRLAPATLV DAGFRFNHSD LATALADAVH
RDA
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