Gene Franean1_1765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1765 
Symbol 
ID5670167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2116816 
End bp2118621 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content74% 
IMG OID641240686 
ProductNAD+ synthetase 
Protein accessionYP_001506109 
Protein GI158313601 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG0171] NAD synthase
[COG0388] Predicted amidohydrolase 
TIGRFAM ID[TIGR00552] NAD+ synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0678882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000901061 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCCAGT TGCGGATCGC CCTCGCCCAG GTGGACACCA CCGTCGGAGA CCTGGACGGC 
AACGCGGAGC TGGTCAGCTC CTGGACCAAG CAGGCACTCG CCCGCAGCGC GCACCTGGTC
GTGTTCGGCG AGATGACGCT GACCGGCTAC CCGGCCGAGG ATCTCGTCCT GCGCCGCTCC
TTCGTGGCCG CCTCCGCCGC CGCCCTCGAG CGCCTGGCGG TCCGGCTCGC CGAGGAGGGC
GCCGGCGAGA TCGCCGTCGT CGTCGGCTAT CTCGACGCCT CCCCGACCCC GGCGCCGGCG
GTCGGGCGTC CGGCCGGGGA GCCGCAGAAC TGCGTCGCCG TGCTGTGGCA GGGCAGGGTC
GCGGCCCGCT CGGCCAAGCA CCACCTGCCC AACTACGGGG TGTTCGACGA GTTCCGCTAC
TTCGTGCCGG GCACCACGTT CCCGGTGTTC CGGCTGCACG GCGTCGACGT CGGGCTGACC
GTCTGCGAGG ACCTCTGGCA GGAGGGCGGC CCGGTCGCGG TGGCCCGCGA GGTCGGGGTC
GGGCTGCTGC TGTGCATCAA CGGGTCACCG TACGAGCAGG GCAAGTCCTA CCACCGGGAC
GAGCTGTGCG CGCGCCGCGC CCGCGAGGCC GGCGCGACGC TGGCATACGT CAACCTGGTC
GGCGGCCAGG ACGAGCTGGT CTTCGACGGC GACTCGCTGG TCGTCGACGC CGACGGCGAG
GTCCTCGCCC GGGCGCCGGT CTTCGCCGAG ACCCTGCTCA CCGTCGATCT CGACCTGCCC
GAAGGCGCCG GCACCGGCGT GGGCCCGGAG ACGGGCCCGG ACGGGCCGGT GGACGCCGGC
GACGGCACCA CGATGGCCGT CAGCCGCGTC GTGCTCGCCG CCGATCCGCT GCCGGCCTGG
GAGCCGCGCC CGGCGACGGT CGCCGACCGG CCCGACCCCG CCGGCGAGCT GTACGCCGCC
GTCGTCACCG GGACCCGCGA CTATGTCCGC AAGAACGGCT TCCGCTCGGT GGCGCTCGGG
CTCTCCGGCG GCATCGACTC GGCCCTGGTG GCCACGATCG CGGTGGACGC CCTGGGCCCG
GACGCCGTGC ACACCGTGGC CATGCCGTCG GCGCACTCGT CCCAGGGCTC GCTGGACGAC
GCCGCCGAGC TCGCCCACCG GCAGCGGACC CGGCACAGCG TCGTCCCCAT CGAGCCGACC
GTGGCCGCCT TCCACGCCGC GCTCGCGGCC GCGGGGGGCC TGCACGGGCT GGCCGCGGAG
AACCTGCAGG CGCGGGTCCG TGGGACGCTG CTGATGGCGC TGTCGAACGA GCACGGCCAC
CTGGTTCTGA CGACGGGGAA CAAGAGCGAG CTGGCCACCG GCTTCTCCAC CCTCTACGGC
GACAGCGCCG GCGGGTTCGC CCCGATCAAG GACGTCTCGA AGACCAACGT GTGGGTGCTG
GCCCGCTGGC GCAACGCGCG GGCGGTCGCC CGCGGCGAGG TCCCCCCCAT CCCGGAGGAG
ATCATCGTCA AGCCGCCGTC GGCGGAACTC GCCCCCGGCC AGCTCGACTC CGACCGCCTC
CCGGACTATT CGGTCCTCGA CGCCGTGCTC GACGACTACG TCAGCCACGA CCTCGGCCGG
GCCGAGCTGA CGGCGGCGGG CCACGACCCG GCGACGGTCG ACCGGGTGAT CCGCCTGGTC
GACCTCGCCG AGTACAAGCG CCGGCAGAAC CCGCCCGGGC CGAAGGTGAC GTCCAAGGCG
TTCGGCCGCG ACCGCCGGTT GCCGATCACC TCTCGCTGGC GCGAGCGCGA CCACTCCGCG
GGCTGA
 
Protein sequence
MAQLRIALAQ VDTTVGDLDG NAELVSSWTK QALARSAHLV VFGEMTLTGY PAEDLVLRRS 
FVAASAAALE RLAVRLAEEG AGEIAVVVGY LDASPTPAPA VGRPAGEPQN CVAVLWQGRV
AARSAKHHLP NYGVFDEFRY FVPGTTFPVF RLHGVDVGLT VCEDLWQEGG PVAVAREVGV
GLLLCINGSP YEQGKSYHRD ELCARRAREA GATLAYVNLV GGQDELVFDG DSLVVDADGE
VLARAPVFAE TLLTVDLDLP EGAGTGVGPE TGPDGPVDAG DGTTMAVSRV VLAADPLPAW
EPRPATVADR PDPAGELYAA VVTGTRDYVR KNGFRSVALG LSGGIDSALV ATIAVDALGP
DAVHTVAMPS AHSSQGSLDD AAELAHRQRT RHSVVPIEPT VAAFHAALAA AGGLHGLAAE
NLQARVRGTL LMALSNEHGH LVLTTGNKSE LATGFSTLYG DSAGGFAPIK DVSKTNVWVL
ARWRNARAVA RGEVPPIPEE IIVKPPSAEL APGQLDSDRL PDYSVLDAVL DDYVSHDLGR
AELTAAGHDP ATVDRVIRLV DLAEYKRRQN PPGPKVTSKA FGRDRRLPIT SRWRERDHSA
G