| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1697 |
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| Symbol | |
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| ID | 5670099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2029908 |
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| End bp | 2030804 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641240615 |
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| Product | shikimate dehydrogenase substrate binding subunit |
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| Protein accession | YP_001506041 |
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| Protein GI | 158313533 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.271026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.1781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGATCA GCTCTCGTGA CCGTGCGGAG CCGGCCGGGC CGGGTCCGCA CGCCGGGCGG
GCGGCGGTGC TCGGCTCGCC CATCGGTCAC TCCCTCTCCC CGGTGCTGCA CACGGCCGCC
TACGAGCGGC TCGGCCTGGA CTGGACCTAC ACGGCGATCG AGTGCGACGA GGCCGGCCTG
CCGGGCATGC TCGACCGCCT GCGTGACGAG CCCGGCTGGG CCGGGGTCTC GCTGACGATG
CCGCTCAAGA CCGCCGCGGT CGACCTGCTT GACGACGTCG AGCCCACCGC GGCCCTGCTC
GGCGCCGTGA ACACCGTGGT CGTCCGGGAG GACGGGCGGC TTGCCGGGTT CAACACCGAC
GTCGACGGCG TCGGGTACGC GCTGCGGCGG CTCACCGGCG GCGTGGCCCC GGTCCAGCCG
CTGGTGCTCG GGGCCGGCGG GACGGCGCGG GCGGTGGTCG CCGCGCTTGC CCGGGTCGGT
GCCACCCGGG TCGCGATCGT GGCGCGCCGC CCCGACGCGG TCGCCGAGCT CGTCGGCATC
GGCGCCCGGC TCGGCGTCTC GGTCACGGCG CTGCCCTGGG ACATCCTCAG CGGCGGGATG
CCGGCTGGGC CGGACCTGGT GGTCGCCACG ACCCCCGCCG GGGTGACCGA CGAGCTCGCG
CGTCGCCCGT GGCCGGTGAC CTGCGCGTTG CTGGAGCTCC TTTACCACCC CTGGCCCACG
GCGCTGGCGG CCTGCGCCTA CCGCGGCGGT GCGCGGGTGG TCGGCGGCCT CGAGGTGCTG
GCCGGCCAGG CGGTCGGCCA GGTGTGCCAC TTCACCGGCC GCCCGGTGGA CGAACGGGTC
CTGCTCGCCG CCGGCCACGC GGCGCTGTCG GCCCGCGTCG CGAGCCGGAT CGGATGA
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| Protein sequence | MVISSRDRAE PAGPGPHAGR AAVLGSPIGH SLSPVLHTAA YERLGLDWTY TAIECDEAGL
PGMLDRLRDE PGWAGVSLTM PLKTAAVDLL DDVEPTAALL GAVNTVVVRE DGRLAGFNTD
VDGVGYALRR LTGGVAPVQP LVLGAGGTAR AVVAALARVG ATRVAIVARR PDAVAELVGI
GARLGVSVTA LPWDILSGGM PAGPDLVVAT TPAGVTDELA RRPWPVTCAL LELLYHPWPT
ALAACAYRGG ARVVGGLEVL AGQAVGQVCH FTGRPVDERV LLAAGHAALS ARVASRIG
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