| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1651 |
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| Symbol | |
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| ID | 5670053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1970962 |
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| End bp | 1972887 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641240569 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001505995 |
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| Protein GI | 158313487 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.695517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0730929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCCG TCACCAAGCA CGGCGATCGC CGCTGGGCCG TCCTGGCCAA CACGACCGCC
GCGGTCTTCA TGTCGGCGCT CGACGGCTCC ATCGTCCTGA TCGCCCTGCC GCCGATCTTC
CTCGGCATCG ACCTGGATCC GCTGGCGCCC GGTAACGTGA GCTATCTGCT ATGGATGATC
ATGGGATACC GCCTGGTGCA GGCGGTGCTC GTCGTGCCGC TGGGGCGGCT GGGTGACATG
TTCGGCCGGG TGCGGATCTA CAACGCCGGC TTTGTGGTCT TCACCGTCGC CTCCATCCTG
CTGTCCTTCG ATCCCTTCCA CGGGCGCAGC GCCGCGATGT GGCTGATCGG CTGGCGCGTG
CTGCAGGCGG TCGGCGGCTC CATGCTGGCC GCCAACTCGG CCGCGATCCT CACCGACGTG
TTCCCGCCCG ACCAGCGCGG TCTGGCGCTC GGCATCAACC AGGTCGCCGC GCTCGCCGGG
CAGTTCATCG GCCTGGTCGC CGGCGGGGTG CTGGCCGTCC TGGACTGGCG TGCGGTGTTC
TGGGTGAACG TGCCCGTCGG TGTGTTCGGC ACCATCTGGG CCTACCGGAC GCTGCGCGAG
CCCGAGCGCC GGGACCGCCC GGAACGGGGC CGCTTCGACT GGTGGGGCAA CATCACCTTC
TCGGTGGGCC TGGGGGCGGT GCTGATCGCC GTCACCGAGG GCCTGCAGCC CTACAAGAAC
CACGCGATGG CCTGGATCAG CCCCAAGGTC CTGGTGCTGC TCATCGGGGG CGTGGCGCTG
CTGGCCGCCT TCGTCGTGAT CGAGAAGCGG TTCGAGTCGC CGATGTTCGA GCTCTCGCTG
TTCCGTATCC GGGCCTTCAG CGCCGGGAAC GCGGCCGGCC TGGCGGTGTC GGTCGCGCGC
GGCGGTCTGC AGTTCATGCT GATCATCTGG CTGCAGGGGA TCTGGCTGCC CCTGCACGGC
TACGACTTCG ACGACACCCC GTTCTGGGCC GGAATCTACC TGTTGCCACT GACCGCCGGT
GTCCTCGTGG CAGGCCCGCT GTCGGGGTTC CTGTCCGACC GCTCCGGCGC CCGCGGCCTG
GCCACCACCG GGATGCTGGT GTTCGCGGGC AGCTTCGTCG GCCTCATGCT GCTGCCCGTC
AACTTCTCCT ACTGGGCGTT CGGCCTGCTG ATCACCGTGA ACGGCATCGG CGCCGGAATG
TTCGCCGCGC CGAACTCGTC CTCGATCATG AGCAGCGTCC CGGCGCACCT GCGCGGGGTC
GGATCCGGGA TGCGCTCGAC CTTCCAGAAC GCCGGCGGCG CGCTGTCCAT CGGGCTCTTC
TTCTCACTCA TGGTCGCCGG GCTGGCGGGC AGCCTGCCGG GCGCCTTCTC CGCCGGTCTG
CGGGCGGAGG GCGTGCCCGC CGACGTCGCC CAGCAGGTCG GTTCCCTGCC CCCGGTCGCG
TCGCTGTTCG CCGCGGTGCT CGGCCTGAAC CCGGTCGAGC ACCTGCTGAG CTCGACCAGC
ACGCTGGACG ACCTGACGCC GGACCACCGG GCGACCGTCA CCGGTCGCGA GTTCTTCCCC
CACCTCATCT CGACGCCGTT CCACGACGGC CTCGTCGTCG TGTTCGTGGC CTCGGCCCTG
CTCGGCCTCA TCGCCGCGGC GGCGTCGGCG ATGCGCGGTG CCCACCACGT CGAGCGGGAC
CCGCTCGAGC CGGTCCCGCT CGCGGTGGGC CTCCTCGAGT CGGTGCCGGC GGAGCCCGTC
CTCCTCGAGG CGTCGGGCCG TGATCGGGTC GGGACCGGTG CTGCCGGGGC CGACGTATCT
GGGGCTGAGG TGCCCGGGGC GGACTCGCCC GGGGTCGACG CGGCCGGTCC CGGGCCCGGA
GCGTCGGGTC CGGCTGGGCC GGGTCCGGGC GCGACCGGAC CGCTCAGAGG CGGCCCCCTG
GGGTGA
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| Protein sequence | MTAVTKHGDR RWAVLANTTA AVFMSALDGS IVLIALPPIF LGIDLDPLAP GNVSYLLWMI
MGYRLVQAVL VVPLGRLGDM FGRVRIYNAG FVVFTVASIL LSFDPFHGRS AAMWLIGWRV
LQAVGGSMLA ANSAAILTDV FPPDQRGLAL GINQVAALAG QFIGLVAGGV LAVLDWRAVF
WVNVPVGVFG TIWAYRTLRE PERRDRPERG RFDWWGNITF SVGLGAVLIA VTEGLQPYKN
HAMAWISPKV LVLLIGGVAL LAAFVVIEKR FESPMFELSL FRIRAFSAGN AAGLAVSVAR
GGLQFMLIIW LQGIWLPLHG YDFDDTPFWA GIYLLPLTAG VLVAGPLSGF LSDRSGARGL
ATTGMLVFAG SFVGLMLLPV NFSYWAFGLL ITVNGIGAGM FAAPNSSSIM SSVPAHLRGV
GSGMRSTFQN AGGALSIGLF FSLMVAGLAG SLPGAFSAGL RAEGVPADVA QQVGSLPPVA
SLFAAVLGLN PVEHLLSSTS TLDDLTPDHR ATVTGREFFP HLISTPFHDG LVVVFVASAL
LGLIAAAASA MRGAHHVERD PLEPVPLAVG LLESVPAEPV LLEASGRDRV GTGAAGADVS
GAEVPGADSP GVDAAGPGPG ASGPAGPGPG ATGPLRGGPL G
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