Gene Franean1_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1650 
Symbol 
ID5670052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1970474 
End bp1970962 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content75% 
IMG OID641240568 
ProductMarR family transcriptional regulator 
Protein accessionYP_001505994 
Protein GI158313486 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.103704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCTG ACGCTGAGAT CGTCGAGGCG GACGCCGCCG GACCCGCCGG ACCCGCCGAA 
CTCGCCGACC TCCTCGAGAT CGCGGCCGGG CTGCGGCTGA GCATGAGCCT GCTGGTGCGG
CGGCTGCGTC TGGTGCAGCC CGACGGTGAG CTGACCGTTG GGGAGATCGC GGCCCTGGTG
CGCCTTGAGC GCGGCGGCCC GACCACCGCC GCGGCCCTCG CGAAGCAGGA GACGATCAGC
CCGCAGTCGA TGGGGGCGAC CCTCGGCGGC CTGGAGGAGC GTGGCCTCGT CGAACGCCGG
CCCGATCCGG ACGACGGCCG CCGGGTGATC CTCTCGCTCG CCGACGCCGG CCGCGAGGCG
CTGCGGGACA GGCGAAACGC CCGCAGCGAG CAGCTCGCGC GGGCGCTGTC CAGCGGCTTC
GACGACGACG AGCTGGCCTG CCTGAAGGCC GCCGCGCCGC TGCTCGAGCG CCTGGCGCAG
CGCATCTGA
 
Protein sequence
MLADAEIVEA DAAGPAGPAE LADLLEIAAG LRLSMSLLVR RLRLVQPDGE LTVGEIAALV 
RLERGGPTTA AALAKQETIS PQSMGATLGG LEERGLVERR PDPDDGRRVI LSLADAGREA
LRDRRNARSE QLARALSSGF DDDELACLKA AAPLLERLAQ RI