Gene Franean1_1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1525 
Symbol 
ID5669929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1827331 
End bp1828086 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content59% 
IMG OID641240445 
Productmethyltransferase type 11 
Protein accessionYP_001505871 
Protein GI158313363 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0012912 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACGTAC AACTCGACTG GGCAAAACGC GCCTACAGTG AGGACTACTT CCATTATATT 
TCGCCTCGCG CTGACGATCG GGAGACGGCG GATATGGTCC GTACTATCGG CGACCTCCTG
GAACTGGAAC CGGGTGCGCG GATTCTTGAT CTGTGCTGCG GCGCGGGCCG GCATACCGTA
ACCTTGGCGG ACCGAGGTTA CACCGTAGTT GGTGTTGACC GGAGTTTTGC CGGACTGGAA
TTGGCGCGTG GCCAGATCAC ATTGAGAGCC ACTTCGGCGC AGGTCGTGTG TGCGGACGTG
CGTAATTTAC CGTTCGGTAG AAACTTCGAC GCGGCCGTCA GCCTGTTTTC TTCTTTCGGT
TACCTGCCCT CGGTAGCTGA GGATGCCGCT TTGGTTCGCG AGTTCTGCCG TGTACTTAGG
CCCGGCGGCT ACTTCCTCCT TGACTTGGTG AATCCCATTC TCCCGATGTT TGGACGGGAA
TCCCGAGTCT GGCGGCAAGC GCGCGGGCGG TTCGTACTTG AAGAGCGTTC CTATGATCCC
GCTTCCGGTA TCAGCACGAG TGTGCGCACG GTGATCAGTG ACGGTTTCCG CCTTAAGCCG
ATCGTGACGT ACATCAGGAT CTACACTCTC GCGGAACTCG CTCGTATTCT CGGCAACGCG
GGTCTCTGCA TTTCCAAGGT CAGGGGTGAC TATCAGGGCG GGCCGTACGA CGCTATGACG
TCGCCCCGAC TGATAGTCCT CGCGGTGCAG CCGTAG
 
Protein sequence
MDVQLDWAKR AYSEDYFHYI SPRADDRETA DMVRTIGDLL ELEPGARILD LCCGAGRHTV 
TLADRGYTVV GVDRSFAGLE LARGQITLRA TSAQVVCADV RNLPFGRNFD AAVSLFSSFG
YLPSVAEDAA LVREFCRVLR PGGYFLLDLV NPILPMFGRE SRVWRQARGR FVLEERSYDP
ASGISTSVRT VISDGFRLKP IVTYIRIYTL AELARILGNA GLCISKVRGD YQGGPYDAMT
SPRLIVLAVQ P