Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1384 |
Symbol | |
ID | 5669792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1676778 |
End bp | 1677692 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641240310 |
Product | integrase catalytic region |
Protein accession | YP_001505737 |
Protein GI | 158313229 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGACA CGTTCGAGTT CATCGATGCG GAGTACGCCG CCCGCACCAC CACGAACACC AGTGCACCAG CGCCGTCGGT CATCCAGATG TGCGCCTGGC TTAGTGTCTC CCGTTCGGGT TTCTACGAGT GGCGTGACCG CCCCGCCTCC GCGACCGCGA CCCGCCGCGG CGCACTCGCC ACACTCGTCG TTCGGTCGTT CACCGCCTCC GACGGCACCT ACGGCTACCG CCGTGTGCAC TCTGACCTGC TCGCCTGGGG CCGCCCCTGC AGCCCCGAGC TCGTCCGCGC CCTCATGCGC GAGCAGGGCC TGGTGCCCTG CCAGCCCCGC CCCTGGCGAC ACACCCTGAC CGAGCCCGGC CAGACCCCGG CCGCGATCCC CGACCTGCTG CAGCGCGACT TCACCGCCGA CACTCCCGGA ACCAAAATGG TCGGCGACAT CACCTACATT CCCACCTGGG AAGGCTGGCT GTATCTCGCG ACCGTCATCG ACTGCCACAC GAAAGCCGTC ATCGGCTGGG CAATGGACGA CAACTACAAG ACCGGGCTCA TCGAAACAGC CATCACCATG GCCGCCCGTA ACCACCAGCT CACCGACGGG GCGATTTTTC ATTCGGACCG CGGAAGCAAC TATACGTCTA CCCAGTTCGC TGCTACGTTG AAGAACCTCG GGATCCGCCA GTCCGTCGGC CGGACCGGAA TTTGCTATGA CAATGCGATG GCCGAGTCCT TCTTCGCAGC TCTCAAGAAC GAACGCGTCC ACCGCACCGC CTATCCCACC CGAGAACACG CCCGACGCGA CATTGCCCGA TACATCGAAC TTCGCTACAA TACGACACGC CGCCACTCGG GACTCGACTA CCGAACCCCG CAGCAGGTCC ACGACGAGTA CCTGAAAAGG CAGACCGCCG CATAG
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Protein sequence | MSDTFEFIDA EYAARTTTNT SAPAPSVIQM CAWLSVSRSG FYEWRDRPAS ATATRRGALA TLVVRSFTAS DGTYGYRRVH SDLLAWGRPC SPELVRALMR EQGLVPCQPR PWRHTLTEPG QTPAAIPDLL QRDFTADTPG TKMVGDITYI PTWEGWLYLA TVIDCHTKAV IGWAMDDNYK TGLIETAITM AARNHQLTDG AIFHSDRGSN YTSTQFAATL KNLGIRQSVG RTGICYDNAM AESFFAALKN ERVHRTAYPT REHARRDIAR YIELRYNTTR RHSGLDYRTP QQVHDEYLKR QTAA
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