Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1352 |
Symbol | |
ID | 5669761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1629659 |
End bp | 1631179 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641240279 |
Product | membrane-bound lytic murein transglycosylase B-like protein |
Protein accession | YP_001505706 |
Protein GI | 158313198 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCGAC CCCGGCTACC AGCATCCGCC CCGTCCTATC CGAGACCCCG AGTAGAACCG GCCCCTACCC AGGCAGCCAA ACACCGACCA GGACCCGGCC GGACCCAGAC GCATCCCACG ATCACCTACA CCCAGCCCCT CCACCGGGCC CGGCCGGAGG CTCAACCTGA CGCACGGGCC GGACGACACC GACCGCCCAG TACGACACGC TCACGGCACC GCCGCCGCAA ACCGCGACCG GCCGCCCACC GCAAACACCG CGCCGGCCTG ATCCGCACGG CGATGCTGCC AGCAGCCATC GCGACAAGCC TGCTGCTGTT CTGCGCCGCC GCCGCACCCC GCGACACCGC CAACCAGCTC GGCCCCGCCC CCGTGCACCC CGGACAGTGG ACCATGCCCG AACTCGTCCC CGGCGGATCC GGGACCGGGA CCGGGAACGT CGACCCGTCC ACCCTCACCA CCCAGACCCT CGCAGCCACC GCCACCTCGC CCGGCACCAA CGCCAACAGC ACCGCGATCA CCCTCACCGC CGCCGACAAA GGCATCCCCG CCCGCGTCCT GACCGCCTAC CGACACGCAG CCGACCAGCT CACCCACGAC AAACCCGGCT GCCACCTGCC CTGGGAACTC CTCGCCGCCA TCGGCAAAGT CGAATCCGGC CACGCCACCG GCCACCCCAT CACCGACGAC GGCACCATCA CCCGCCCCAT CCTCGGCCCA CCCCTCAACG GCACCGCCGG CGTCGCCCTC ATCCACGACA CCGACAACGG AACCCTCGAC CACGACACCA CCTACGACCG GGCCGTCGGC CCCATGCAGT TCATCCCCAC CACCTGGCGC ACCTCCGGCC ATGACGGCAA CAACGACGGA CGCAACGACC CCCACAACAT CGACGACGCC ACCGTCGCCG CCGGCCACTA CCTCTGCGCC CACGGCCGCG ACCTCACCAA CCCCGACCAG CTCCGCGCCG CGATCCTCGC CTACAACCCC TCCGACACCT ACGTCCGCAC CGTCCTCACC TGGATGAACG GCTACCGACA GACCGGCGCC ACCGCCCTGC CCGGCAACCC CGCCCCACCG ACACCCCCAA CACCCAACCA CCCAGCCGTT CCCACGCCGC CCCTCCATCC TTCAGCCCCA GCCAGTCCCG AGAGCCCGCA CATACCCGAA CCGACCACGC CACCCACCCC CAAGACCATC CCCGGCATCA CGATCATTCC GCTGACCCCA AGAACACCGA ACCCAACGCC CTCAACTCCG CCGACTATGA CGCAGCCGAA CAGCCCCGAG ACAACCAACC CACCGAGCAC ACCCGAGACC CCACCCACAA CGGCGCCGCC GCCGACCCCG TCCACTGTGC CGACGATCCC CGACCCGTCT GGACCAGAGG CCGAGGAAAC ACCCCGCGAG TCACCGAACA CCGCCCTGAC CGCCGGAAAC ACCGTTCCGA CCGGCTCCCT GCCCGAGGCG CCAACCACCC CCGCACCCGC AGCCCCGGCT CCGGCATCGG AACAGCGTTG A
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Protein sequence | MSRPRLPASA PSYPRPRVEP APTQAAKHRP GPGRTQTHPT ITYTQPLHRA RPEAQPDARA GRHRPPSTTR SRHRRRKPRP AAHRKHRAGL IRTAMLPAAI ATSLLLFCAA AAPRDTANQL GPAPVHPGQW TMPELVPGGS GTGTGNVDPS TLTTQTLAAT ATSPGTNANS TAITLTAADK GIPARVLTAY RHAADQLTHD KPGCHLPWEL LAAIGKVESG HATGHPITDD GTITRPILGP PLNGTAGVAL IHDTDNGTLD HDTTYDRAVG PMQFIPTTWR TSGHDGNNDG RNDPHNIDDA TVAAGHYLCA HGRDLTNPDQ LRAAILAYNP SDTYVRTVLT WMNGYRQTGA TALPGNPAPP TPPTPNHPAV PTPPLHPSAP ASPESPHIPE PTTPPTPKTI PGITIIPLTP RTPNPTPSTP PTMTQPNSPE TTNPPSTPET PPTTAPPPTP STVPTIPDPS GPEAEETPRE SPNTALTAGN TVPTGSLPEA PTTPAPAAPA PASEQR
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