Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1344 |
Symbol | |
ID | 5669755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 1617849 |
End bp | 1618778 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641240275 |
Product | ABC transporter related |
Protein accession | YP_001505702 |
Protein GI | 158313194 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.331631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCGG CTGTCGAGAC GACCGGGCTG GGCGCGCGCT ACGGGCGCCA CTGGGCAGTA AGGGACTGCA CACTGTCTCT ACCCCGCGGG GGAATAGTGG CCCTAGTCGG GCCGAACGGC GCTGGCAAGA CGACACTGCT ACACTTGGCC GCGGGCCTGC TCCGCCCGAG CACGGGCAGT ATCCGGGTGC TGGGCGAGAA ACCTTATTAC AGCTCCGGGC TGATGACCAG GGTTGGTTTC GTGGCTCAGG GCGCCCCCCT CTACAGCGAC TTCACCGCGG ACGAACTACT GGTAATGGGC TCCAAGCTCA ACCGGGGCTT CGAGCAGGCG TCGGCGCGTG AACAACTGAG GCGGCTTGAT ATCCCATTGC ACTGGCGGGT AGGGAGCCTA CCCGGAGGGC AGCGGGTACA GGTGGCGCTC ACACTAGCGC TGGGAAAGCG GCCCGAACTT CTGCTCCTGG ACGAGCCGGC AGCCGGGCTT GACCTGCTGG CACGACGAGA GTTCCTGCGG ACATTGATGG GTAGCACTGC CGAGCAGGGG GCTACGATAG TGCTGTCCTC GCACCTTATC GAGGATCTCG ACCGAGTGTG TGACTGGCTG GTGATAATGT CCGCCGGACA GGTACAGGTC CTCGGCTCGG TCGAGGAGCT GAAAGCCCGG CATAAAGTAC TCATCGGCCC GGTAGTCATC GGCTCGGCTC ACCAAAAGAA GATCATTGGT GTGGCCCAAG TCGTGCGAGC CAGCCACACC GATCGCCAGT CAACCTTGTT GGTGCGCACC GACGGAGTGG TTCACGACCC TTCTTGGATG GTCCAGGACG TCAGCCTCCA AGACCTCGTC CTCGCCTACC TCGCCGATCC CGCGGAGGGC CTGCTACCAG GTCCCATCGG GCATCGCTCA GACAACGGCG TGCAGGGGGT GCATGTATGA
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Protein sequence | MTAAVETTGL GARYGRHWAV RDCTLSLPRG GIVALVGPNG AGKTTLLHLA AGLLRPSTGS IRVLGEKPYY SSGLMTRVGF VAQGAPLYSD FTADELLVMG SKLNRGFEQA SAREQLRRLD IPLHWRVGSL PGGQRVQVAL TLALGKRPEL LLLDEPAAGL DLLARREFLR TLMGSTAEQG ATIVLSSHLI EDLDRVCDWL VIMSAGQVQV LGSVEELKAR HKVLIGPVVI GSAHQKKIIG VAQVVRASHT DRQSTLLVRT DGVVHDPSWM VQDVSLQDLV LAYLADPAEG LLPGPIGHRS DNGVQGVHV
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