| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1233 |
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| Symbol | |
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| ID | 5669646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1475853 |
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| End bp | 1476353 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641240165 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001505593 |
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| Protein GI | 158313085 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.148676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00561635 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGGTGGC GTGAGGCAGC CGTCGGGTTG GTCGCGGCCG GGTCGGCCGC CGCGGCTCCC
GGGCCGCGTC CCGGGCCGCG TCCCGGGCCG CGTCCTGGGC CGAGCGGGCA GTCCCAGCCC
CAGCGTCCCC GGCCTCAGCC CCACGCCCGG CCTGAGCCTC GACCTCGGGC CGGGTCCCGG
TCGCGGGCCG GTGGGCGGGG GAGGTCGGGT GCGCGGCCGC CGCTGCGGCT GACCAGGCGC
GGCCGCATCG TCGTGGTGGC GCTGGCGAGC ACGCTCCTCG GCCTTGTCTT CTCGTTGGTG
CTGGTGACGG CGTCACAGGC GTTCACCGGC GTCCCGGTGA GCTACCGGAC GCACGTCGTG
CGGTCCGGGG AGACACTCTG GGAGATCGCC CACGAGGCCG CCCCCGAGGC CGACACCCGC
GACACCGTCC GCGGGCTCAT GACCCTGAAC GGCCTCGACA CGGTGACGCT CATGCCCGGT
CAGGAGCTCC GGCTCCCCTG A
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| Protein sequence | MWWREAAVGL VAAGSAAAAP GPRPGPRPGP RPGPSGQSQP QRPRPQPHAR PEPRPRAGSR
SRAGGRGRSG ARPPLRLTRR GRIVVVALAS TLLGLVFSLV LVTASQAFTG VPVSYRTHVV
RSGETLWEIA HEAAPEADTR DTVRGLMTLN GLDTVTLMPG QELRLP
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