Gene Franean1_1157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1157 
Symbol 
ID5669570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1377960 
End bp1379552 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content76% 
IMG OID641240089 
ProductMg chelatase, subunit ChlI 
Protein accessionYP_001505517 
Protein GI158313009 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID[TIGR00368] Mg chelatase-related protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.216513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0734842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTG CGCGGTCGCT GGCCGTCGCG GTCGTCGGTA TCGAGGGCCA TCTCGTCGAG 
GTGGAGGCCG ACCTGGCCCG CGGCCTGCCC GGGCTGACGC TCATCGGCCT TCCGGACGCG
GCACTCCACG AGGCCCGGGA CCGGGTGCGG GCCGCTGTCG TCAACTCGCG TGAGCGCTGG
CCGGGCCACC GGATCACGGT CGGCCTGTTC CCGGCGACCC TGCCCAAGTC CGGCAGCGGC
TTCGACCTGG CCATGGCCGC CGCGATCCTG GGCGCCGCCG GCGTGGTCCC CGCAGCCGCC
CTCGGTAGCA GGGTCCTGAT CGGTGAGCTC GCGCTTGACG GCCGGCTTCG GCCGGTGCGC
GGGGTGCTGC CAGCCGTTCT CGCTGCGGTT GAGGCCGGCC TGGCGAACAT CGTCGTGCCC
GAACCCAACG CGGGCGAGGC GTCGTTGGTC CCGGGTGCGG TCGTCGAGCC CATGCCCGAC
CTCGCCAGCG TGCTCGGCCT GCTGCGCGGC CGCCCACGGC TCGGCCTGGC ACGGTTCCCC
GCGGCATTGG CACCGGCACG GGTGTCGGAG CCCGCATCGG TGTCGGCATC GGCGGCGCCG
CCGCCGGAGC GGGAGCCGGA GCCGATCGGG CCTGATCTCG CGGACGTCGC CGGCCAGAGC
CGGGGGCGCC TGGCCGTGGA GGTGGCCGCC GCGGGCGGAC ACCACCTGTT CATGCAGGGG
CCGCCCGGCT CGGGCAAGAC CATGCTGGCC GAGCGGCTGC CCGGGCTGCT TCCGCCGCTG
GACACCGCCG CCGCGCTGGA GGTCACCGCC GTGCACTCGG TGGCGGGCGT TCTTCCCGTC
GGCCGCCCGC TGGTCACGCG GCCTCCCTTC CGTAGCCCGC ATCACTCCGC CACGCCGGCG
GCGCTTGTCG GCTCCGGCTC CGCGGTGATC CGCCCGGGGC TGGCCAGCCA GGCGCACCAC
GGCGTCCTGT TCCTCGACGA GGCACCGGAG TTCGGCCGAA CCAGCCTGGA CGTGCTGCGC
CAACCGCTCG AGAGCGGTGT CATCGAGGTG GCGCGGGCCC GGGCCACCAC CCGGTTCCCC
GCCCGCTTCC TGCTCGTGCT GGCCGCGAAC CCGTGCCCCT GCTCGCGGGC CCGCGGCCCC
CGGGACAACA CCTGCGACTG CCCGAGCACG GTGCGCCGGC GCTATCTGGC GAGGCTGTCG
GGGCCGCTAC TCGACCGGAT CGACATCCAG GTGGCGTTGA CCGCGCCGAG CCGTGCCGAG
CTGCGGGCCG ATCGGGGGCT TGGCACCTCC TCGAGCGTCG TCGCCGAGCG CGTCGCTTCG
GCCCGGGCCG CGATGCGGCG CCGGCTCGCC GGCACGCCGT GGCGGCGTAA CGCCGAGGTG
CCCGGCCCGT CACTGCGCCG CCAGTGGCCG CTGCGGCCGG CTGCGACCCG GCTCGCCGAC
CGTGCCTTCG AGCGGGGCCT GCTCACCGCG CGTGGGCTGG ATCGGGTGCT GCGCGTCGCC
TGGACGGTGG CGGACCTCAA GGGCGAGGAC CGGCCGGGCC CCGACGAGAT CGGGCTCGCC
CTGGACCTAC GCCTTCCCGG GGGATCAGCG TGA
 
Protein sequence
MALARSLAVA VVGIEGHLVE VEADLARGLP GLTLIGLPDA ALHEARDRVR AAVVNSRERW 
PGHRITVGLF PATLPKSGSG FDLAMAAAIL GAAGVVPAAA LGSRVLIGEL ALDGRLRPVR
GVLPAVLAAV EAGLANIVVP EPNAGEASLV PGAVVEPMPD LASVLGLLRG RPRLGLARFP
AALAPARVSE PASVSASAAP PPEREPEPIG PDLADVAGQS RGRLAVEVAA AGGHHLFMQG
PPGSGKTMLA ERLPGLLPPL DTAAALEVTA VHSVAGVLPV GRPLVTRPPF RSPHHSATPA
ALVGSGSAVI RPGLASQAHH GVLFLDEAPE FGRTSLDVLR QPLESGVIEV ARARATTRFP
ARFLLVLAAN PCPCSRARGP RDNTCDCPST VRRRYLARLS GPLLDRIDIQ VALTAPSRAE
LRADRGLGTS SSVVAERVAS ARAAMRRRLA GTPWRRNAEV PGPSLRRQWP LRPAATRLAD
RAFERGLLTA RGLDRVLRVA WTVADLKGED RPGPDEIGLA LDLRLPGGSA