Gene Franean1_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1071 
Symbol 
ID5669485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1267130 
End bp1267906 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content74% 
IMG OID641240000 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001505433 
Protein GI158312925 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.540007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTCG TGCGGCTCGA GGTCTCCGAC GGTGTCGGGA CGATCAGGCT GGACCGGCCG 
CCGATGAACG CGCTCAACGC GGCGCTTGCC GCTGAGCTGC GCGCCGCCGC CCTCGAGGCC
ACCGCCCGGG CGGACGTCCG GGCCGTTGTC GTCTACGGCG GCGAGAAGGT GTTCGCCGCC
GGGGCGGACA TCAAGGAGAT GGCGGGGCTG GACGTCGCCG GCATCACCGG CTGGGTCCGC
GATCTGGCCG CGGCCTTCGA CCTGGTGGCG CGTATCCCGA AGCCGGTCGT CGCGGCCGTC
ACGGGCTATG CCCTCGGCGG CGGCCTGGAG CTCGCGCTGT GTGCCGACTT CCGGGTCTTC
GCCGAGAACG CGAAGGTCGG GCTGCCCGAG ATCACCCTCG GTGTGATCCC GGGCGCCGGT
GGCACGCAGC GCCTGCCGCG GCTCGTCGGG CCGGCCCGGG CCAAGGATCT CGTCTTCAGC
GGCCGGCAGG TGCGGGCCGC CGAGGCGGAG GCGATCGGGC TGGCCGACAA GGTCGTCCCG
GCCGATGAGG TGCACGCCGA GGCCCTGCGG ATGGCGGGTC GCTTCGTCAC GGGGCCCGCC
CTGGCACTGG CCGCGGCGAA GCAGGCGATC GACGACGGCG GCGACCTCGC GCTCTCCGAG
GCGCTGCGGT TGGAGTCGGC GCTGTTCATC GGCCTGTTCG GTACCGAGGA CCGCCGCCAC
GGCATGGACT CGTTCATCGA GCGCGGCCCG GGCAAGGCCG ACTTCGTCGG CCGCTAG
 
Protein sequence
MAVVRLEVSD GVGTIRLDRP PMNALNAALA AELRAAALEA TARADVRAVV VYGGEKVFAA 
GADIKEMAGL DVAGITGWVR DLAAAFDLVA RIPKPVVAAV TGYALGGGLE LALCADFRVF
AENAKVGLPE ITLGVIPGAG GTQRLPRLVG PARAKDLVFS GRQVRAAEAE AIGLADKVVP
ADEVHAEALR MAGRFVTGPA LALAAAKQAI DDGGDLALSE ALRLESALFI GLFGTEDRRH
GMDSFIERGP GKADFVGR