Gene Franean1_0863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0863 
Symbol 
ID5669277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1008519 
End bp1008980 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content72% 
IMG OID641239790 
ProductNUDIX hydrolase 
Protein accessionYP_001505225 
Protein GI158312717 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.522755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGTGT GGCTGGTGGA TGTGTGGACG GAGGTGGGGT CGGTGGAAGA GGGGCGGCTC 
GTGGTCGCTG TCGCGTTGAT CGACGGTGAT CGCAGGGTGC TCGCCGCGCG GCGGGTCTCG
CCGCCGGCGC TCGCGGGCAT GTGGGAGTTC CCGGGCGGCA AGGTCGAGCC TGGTGAGGAC
GAGCTCGCGG CGCTGCGCCG GGAGTGCCGC GAGGAACTGG ATGTGGAGAT CGAGGTCGGG
CGCCTCTTCG GGGAGATCGC GCTGCCACGT CCGGGGTGGC GGATGCGGTT GTGGCTCGGG
CGCGTCGCCG CGGGCGAGCC GTTTGCCGCC GAGCATGACG ACCTGCGTTG GCTGGGTGTG
GGCGAGCTTG ACGACGTCCC GTGGCTCCCG GCGGACGCGC CGCTGGTCGA TGCTCTCCGG
GCGGAGCTTG CGGAGCCGGT GGAGGGTTCT GTGGGGTCGT GA
 
Protein sequence
MDVWLVDVWT EVGSVEEGRL VVAVALIDGD RRVLAARRVS PPALAGMWEF PGGKVEPGED 
ELAALRRECR EELDVEIEVG RLFGEIALPR PGWRMRLWLG RVAAGEPFAA EHDDLRWLGV
GELDDVPWLP ADAPLVDALR AELAEPVEGS VGS