Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0750 |
Symbol | |
ID | 5669166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 875208 |
End bp | 876269 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641239677 |
Product | polysaccharide pyruvyl transferase |
Protein accession | YP_001505114 |
Protein GI | 158312606 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5039] Exopolysaccharide biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.759816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000135712 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACGGAGG CCGCGACAGG GGTCCCGTAT GCCTCGACGG CAGCGGTCGC ATCCACTGCC CGCCTGATCG AGAGCCTGTC GACGCGGGCC ACGGCCGCCG TCGCCGACCT GCTGCCGCCG GGGACGACCG ACGTGGCGCT CCTCGACTTC CCGTACCACC GCAACAGTGG TGACTCGGCC ATCTGGCTCG GCGTACGCCA GATTCTCCGA CAGCTGGGAG TAAGGGTCGC CTACGTCGCG GACACCGCGC GCTACCGGCC GGACCGGTTA CGGGAGGCAC TGCCGGAGGG GCCTGTCCTG TTACTCGGCG GGGGGAATTT CGGTGACCTC TGGCCGGGGC ATCAGGAGCT CCGGGTCCGG GCCCTGCGTG ACTTCCCGGA CCGTACCGTG ATCCAACTTC CGCAGAGTAT TTCCTTCCGT AGCCGGACGG CGCTTTCCGA GGCCCAGCGC GTGACCGCGG CCCACCCACA TTTCACTCTT ATGGTCCGTG AACGGCGCAG CCTTTCGTTC GCCACCGAGA ACTTCGATGT GCCGCTCGTG TTCGCGCCGG ACTCGGCCCT GGCCAACGGC CCGCTGAGAC CGCCGTGGCC GGTACGTCCC GACGGCGTGC TGTGTCTTGC CCGCGATGAC GTTGAGGGCA CCGGAGCCAT CGCGGGCGTG GCCGGCCCCG GCATACGTCG GGCCGACTGG GGAATGCGTG GCCTGCCCGC GGCGCGGTGG AGAGCGGCGA AGGCGCTGCC GAAACTCGAG CGGCATGCCC TGGCCCGGCA TCCGGATGCG CACCGGGCGG CCCGCCCCGC GCTGCACGCG GCCTATGAAA CAATGGCGAA GACAAGCGTG GGAACGGCGA CGAGCCTCCT GTGCACCGCG CGTTATGTGG TGACCGACCG GTTGCACGCG CACATTCTCT GCCTGCTTCT CGGTATCCCC CACTCGGTGT TTGACAACAG CTACGGAAAG GTCAGTGGGA CCTTCGAGGC GTGGACCTCG GACAGCGACC TCGTGCACTG GGCGACCAGC GCGGACGAGG CCCTGGAGAG GTGCCGGGAG TTCGCGCCGT GA
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Protein sequence | MTEAATGVPY ASTAAVASTA RLIESLSTRA TAAVADLLPP GTTDVALLDF PYHRNSGDSA IWLGVRQILR QLGVRVAYVA DTARYRPDRL REALPEGPVL LLGGGNFGDL WPGHQELRVR ALRDFPDRTV IQLPQSISFR SRTALSEAQR VTAAHPHFTL MVRERRSLSF ATENFDVPLV FAPDSALANG PLRPPWPVRP DGVLCLARDD VEGTGAIAGV AGPGIRRADW GMRGLPAARW RAAKALPKLE RHALARHPDA HRAARPALHA AYETMAKTSV GTATSLLCTA RYVVTDRLHA HILCLLLGIP HSVFDNSYGK VSGTFEAWTS DSDLVHWATS ADEALERCRE FAP
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