| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0745 |
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| Symbol | |
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| ID | 5669161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 870145 |
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| End bp | 871782 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641239672 |
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| Product | carbohydrate-binding CenC domain-containing protein |
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| Protein accession | YP_001505109 |
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| Protein GI | 158312601 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.556771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00012998 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATCAGA GCATCATCGA GGACGAGGCA AGGCCGGACG GCCCCGCACA GAATTCGCGT
GGCGCGGGCC GCCGGGTGGG GCGGCGTGAC CGGCGCAGGC GTGACCGCGT GGTCCGAACC
GCCAGACGCA AGATCCTGCT ATCCGCCCTC TGTCTCCTTG TCGTGGTCGG CGGGACGACC
GGCGTGATCC TGTACTCCGC GCTCGGGGGC GACGATGCGG GTGGGAAGCC CATCCAGCTG
GCCGACACCG AGCCGCGATA CCAGACCGGT GTGAACTTCC TTCCGAACCC TGGCTTCGAG
AACACGGTCG CGGGCTGGTC GGCCGGGCCA TCCGAGAGCG CTCGCCTGTC CCCGACGGTG
CCCGGCCGCA GCGGGTCCGG CGCGGCGATC GTCACGGCCA GGGCCCGGGT ACCCGCCATC
ACCCTGACCG ACACCCCGGA CGCCGTGACC TGGACCGGCG GCAGGCTGAC CTATCTCGGC
GCCGTCTGGG TGCGCACGAC CGCCCCGGGC ACCCGCGTCC AGCTGAAGCT GACCGAACTC
GACGGTGCCC GCACGGCCGC ACGCGCCCTG ACCAACGTCA CCCTGAACGA TGCCACCTGG
CGAAAGGTCG AGGTCTCCCT GCGGGCGACT GCCACGGGCC ACCGGCTGGA CTTCGCGGTC
GTCGCCGACC GGCTTCCCGC CGGCCAGTTC CTCTACGCGG ACGATGCGTC CCTTCTCATC
GGGAGGCCGT CATCGCCGGC CCCGACGGGG CCGGCGGCGA CCACGGGCGG CCAGCCGAGC
GCGTCCCCGC CGGTGAGCGG CAGCCCGCGG CCTGGCACGA GCGCGACTCC CAGCGCGCCG
ACGAGTGAGC GACCGCGCCC GAGCACGGCA CCGCCCGCGC CGGGTGGGTC GGGTATCACG
CCGATCCCGG CCGGCATGCC CAACTCGAGC ACCACTGGCG TCCGGGCGGG GACGTCGCTG
ACCCTCCTCT CCGGTGACCA GCGCATCACC CGCGCGGGAA CGGTGATCGA GAACAGGGAT
GTGCGCGGGT GCATCCGAGT GGAGGCCGAC AACGTCGTCA TCCGAAACTC CCGGGTCTCC
TGCCGGTCGT CGGGTTCCGC GGTGATCAAG AACCTCGGCC AGAACCTGCT GGTCGAGGAC
GTCACCATCG ACGGGCAGGG CGCCTCGAAC TCCGGCATGT CGACCGCCGA CTTCACCGCC
CGCCGGGTGA ACATCTCGAA CACGATCGAC GGCTTCTTCA TTAACGACAA CATCCTCATC
GAGAACTCGT ACGTTCATCA CCTCGCCCAG ACCCCGTCCA GCCACAACGA CGCGGTACAG
ACCACCGGCG GCAGCAACAT CGTGCTGCGT CACAACACCC TGATTCCCAT CAACGAGACG
ACCGGCGAGT CGAGTAACGC CGGCTACATG TTCGGGCAGA ATATCGGGCC GATCTCGCGG
GTTGTCTTCG ACGGCAACTT CATCAACGGC GGCGGCTTCA CCCTCAACGG TGCCGGTGAC
GTGACCTTCG TGAACAACCG GTTCGGCCGC AACTGCCTGT ACGGGATCAA GGCGTTCAAG
GGCAGCCAGG TGAAGTTCGA CCAGTCCAAC ATCTGGGCCG ACACCGGCCG TCCGGTGAAC
GACGACCCCA AATGCTGA
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| Protein sequence | MHQSIIEDEA RPDGPAQNSR GAGRRVGRRD RRRRDRVVRT ARRKILLSAL CLLVVVGGTT
GVILYSALGG DDAGGKPIQL ADTEPRYQTG VNFLPNPGFE NTVAGWSAGP SESARLSPTV
PGRSGSGAAI VTARARVPAI TLTDTPDAVT WTGGRLTYLG AVWVRTTAPG TRVQLKLTEL
DGARTAARAL TNVTLNDATW RKVEVSLRAT ATGHRLDFAV VADRLPAGQF LYADDASLLI
GRPSSPAPTG PAATTGGQPS ASPPVSGSPR PGTSATPSAP TSERPRPSTA PPAPGGSGIT
PIPAGMPNSS TTGVRAGTSL TLLSGDQRIT RAGTVIENRD VRGCIRVEAD NVVIRNSRVS
CRSSGSAVIK NLGQNLLVED VTIDGQGASN SGMSTADFTA RRVNISNTID GFFINDNILI
ENSYVHHLAQ TPSSHNDAVQ TTGGSNIVLR HNTLIPINET TGESSNAGYM FGQNIGPISR
VVFDGNFING GGFTLNGAGD VTFVNNRFGR NCLYGIKAFK GSQVKFDQSN IWADTGRPVN
DDPKC
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