Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0677 |
Symbol | |
ID | 5669094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 799361 |
End bp | 800125 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641239604 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001505042 |
Protein GI | 158312534 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.456581 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTACGTC CGCGCCGTCC ATGGCAGATG CTCGGCGTCA TGACACCGTC GCCAACCACC CGGGCCTCCG GCTCGGGAAA CCTGCGGGAC CATGTCTACG TCGCGCTGCG CCATCGGCTC ATGTCAGGGG AGTTCTCCTT CCGGGACCGC CTGGGAGAGG AACGCGTCGC CGCGCTGCTG GGAGTGTCGA GGACACCGGT ACGCGAGGCC CTGACCCGGC TCGCCGGGGA CGGCCTGGTC GAGAAGCGGC AGGACGGCGG CTACTACCCC GCCGAACCCG ACCTCGCCGG GCTGCGCGAC CTGTACGAGA TCCGGGTCAC GCTGGAGCTG CGCGGGCTGC AGCGGGCGCT GGAGTCCGGC GCGGCGCACC AGGCCGCGCT GCTCGAACCG CTACGCGACG ACTGGCGGGC GCTACGCGCC GATCCCCCCA CGCCCGACCC GGCCTTTGTG GCCCTGGACG AGAACTTTCA CATCACGCTC AGCCGGGCGT CCGGCAATGG CGAACTCGCG AACATGCTCG ACGCTGTGAA CGCCCGGATC CGCCCCGTGC GGATGTACGA CTTCCTGACC GCCGACCGGA TCGATCTGAC CATCACCCAG CATCTCGACA TCCTCGAGAA GGTGCTCGCC GGGGAGATGG AGGCGGGTGT GCGGGCGCTG CGCAGCCACG TCGGCGAGTC GATGGAGGTC GTGGAGCGGC GGGCGGCCCA GGCCATCACC CAGATGGTGC TGAACCGCGG ACGTCCGCCC CGCTCGGCCA TCTAG
|
Protein sequence | MVRPRRPWQM LGVMTPSPTT RASGSGNLRD HVYVALRHRL MSGEFSFRDR LGEERVAALL GVSRTPVREA LTRLAGDGLV EKRQDGGYYP AEPDLAGLRD LYEIRVTLEL RGLQRALESG AAHQAALLEP LRDDWRALRA DPPTPDPAFV ALDENFHITL SRASGNGELA NMLDAVNARI RPVRMYDFLT ADRIDLTITQ HLDILEKVLA GEMEAGVRAL RSHVGESMEV VERRAAQAIT QMVLNRGRPP RSAI
|
| |