Gene Franean1_0672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0672 
Symbol 
ID5669089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp795061 
End bp795528 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content74% 
IMG OID641239599 
ProductMarR family transcriptional regulator 
Protein accessionYP_001505037 
Protein GI158312529 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.211167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTAG ATCAGCATGC CAATGCCGTG GGCCTCACCG AGGTCGTCAC CCGGCTGCGG 
CGGGTGCTGC GCAGCAGCAT CCGCGCGGAC ATCCCGTGGG AGTCGCTGCC CATGGCCCAG
GTGGAGCTGC TCCAGTGCGT CGCCGAGCGG GACGGCACCC GGGTCGGTGA GCTCGCCGGG
CTGTTGCGGC TCGCGCCGAA CTCGGTCTCG ACGCTGGTCG CCCAGCTCAC CGATGCCGGC
CTCGTGCGGC GCGAGCGGGA TCCGGCGGAC CGCCGGGCCG TGGCCCTGCG GCTCACCGAG
GCGGGCGAGC AGGCGCTCAC CGGATGGCTG CAGGCGCACG AGCGGCGGAT CGGCACCGCC
ATGGAGCTCC TCGCCGACCA CGACCGCGAC GTGATCATCG CGGCGTTGCC GGCCCTCGGC
CGCCTGGTCG AGGCGCTAGA CGACCGCCCC CGCCCGCCCA ACGAGTGA
 
Protein sequence
MTVDQHANAV GLTEVVTRLR RVLRSSIRAD IPWESLPMAQ VELLQCVAER DGTRVGELAG 
LLRLAPNSVS TLVAQLTDAG LVRRERDPAD RRAVALRLTE AGEQALTGWL QAHERRIGTA
MELLADHDRD VIIAALPALG RLVEALDDRP RPPNE