Gene Franean1_0629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0629 
Symbol 
ID5669046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp729098 
End bp729646 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content70% 
IMG OID641239556 
Producthypothetical protein 
Protein accessionYP_001504994 
Protein GI158312486 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.873986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCACCT CGCCCACCAC CGTCAACCCG GACGTCCTGC CCGGCGTTGC GCGCCAGATC 
GGCTACATCG TCCGCGACCT CGACGAGGCG ATCGCCTCCT GGCTGAGCCT GGGCGTCGGC
CCCTGGTACG TGCTGCGGGA GCACCCGCAG GCGGGGCTCT TCCGCGGCAA GGACTGCGAG
GTGACCATGT CGGTCGCCTT CTCCAACACC GGCGACATGC AGGTCGAGCT GATCCAGCAG
CACGGTGACG CGCCCAGCAT CTACACCGAG TTCCTCGAGT CCGGGAAGGA GGGCTTCCAC
CAGCTCGCCT GGTGGGCCCC GGACTTCGAC GCCACCATGA GCTCGATCGA GGCCGCGGGC
TGGCCGATCG TCTGGACCGG CGGCGGTGAC GGCGCGACCC GTTACGCCTA CTTCGAGCCG
CCCGCCGGCC CGGCCACCAT CATCGAGATC ATGGAGCTGA ACCCGGCCAC GGAGGGCATG
GCCAAGTTCG TCCGCGCCGC CACCGAGGGC TGGGACGGCA CCGACCCCGT CCGCACCCTC
GGCGTCTGA
 
Protein sequence
MTTSPTTVNP DVLPGVARQI GYIVRDLDEA IASWLSLGVG PWYVLREHPQ AGLFRGKDCE 
VTMSVAFSNT GDMQVELIQQ HGDAPSIYTE FLESGKEGFH QLAWWAPDFD ATMSSIEAAG
WPIVWTGGGD GATRYAYFEP PAGPATIIEI MELNPATEGM AKFVRAATEG WDGTDPVRTL
GV