Gene Franean1_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0624 
Symbol 
ID5669041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp724258 
End bp725325 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content71% 
IMG OID641239551 
Productaminoglycoside phosphotransferase 
Protein accessionYP_001504989 
Protein GI158312481 
COG category[R] General function prediction only 
COG ID[COG3173] Predicted aminoglycoside phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCG CACCGGTCTT CTCCAAGGGC CGCGACCTCG ACGCCACGGT CGAGGTCCTG 
CGCCCGTGGC TCGCGGCCCG ATTAGGCGTC GACGACGTCA CGCTGGGCGA GCTGACCTAT
CCGACCGGGG CCGGGGTCTC CAACGAGACG ATCCTGCTCG AAGCCCGCTC GGCGGGCCGC
GTCGACGACC TGGTCCTGCG GATCGGGCCC AGGCCCGAAC ACCAGATGTT CCTCGACCCC
CGGTTCCGGA TGCAGTACGA CCTGCTGGCC GCCCTGCGCC GCAACGGCTC GGTGCGCGTC
CCGGAGACGC TGTGGTTCGA GGACGACGCC GCGCTGCTCG GGCAGCCGTT CTTCGTGATG
CGCCGGATGC GCGGCCGGGT GCCGGTCAGC ATGCCGGTCT ACAACAAGAC GGGGTGGCTG
ACGGAGGCGA CACCCGCCCA GCGGCGGACC CTGTGGGAGA GCGCGATGCG CCAGTTCGCC
GCCATCCACG TGATGCCTGT GGACGAGGTG GGCTTCGTCG ACCTCGCCGA GCTGGGCGGC
ACCGGCCCCG AGCAGCAGCT CACCTACTGG AACCGCTTCG CGGCGTGGGC GCTCGAGGAC
GAGGTGCCCG ATGCAGTGCG CACCCTGTTC GAGTGGCTGG CCGCGAACCG GCCCGCCGAG
CCCGTGCCGG GCCTGTCCTG GGGCGACGCC CGGATCGGCA ACATGATGTT CGGCGACGAC
TTCGAGGTCG TCGGCGTCAT GGACTGGGAG CAGGCGTCGC TGGCCGGCCC GATGGCCGAT
CTCGGCTGGT GGCTGCACTT CGACGAGATC CACAGCTCCT TCCAGGGCGT GCCGCGCCTC
GACGGCCTCG GCACCCGGCA GGAGACCATC GACCTCTGGG AGGAGCTGAC CGGCCGGCGG
GTCGAGAACC TGCTCTGGCA CGAGGTCTTC GCCTGCGTCA AAACGGCCCT GCTCGGCCTG
CACACCCGTC GGTCGATGCG GCTCCCGCTG GCGGGCAGGT CGGAGCGCGG CCCCTACCTG
GAACGCGCCT ACCGCCTGCT CGACCTCGAC CTGGAGGAAC TGTCATGA
 
Protein sequence
MSVAPVFSKG RDLDATVEVL RPWLAARLGV DDVTLGELTY PTGAGVSNET ILLEARSAGR 
VDDLVLRIGP RPEHQMFLDP RFRMQYDLLA ALRRNGSVRV PETLWFEDDA ALLGQPFFVM
RRMRGRVPVS MPVYNKTGWL TEATPAQRRT LWESAMRQFA AIHVMPVDEV GFVDLAELGG
TGPEQQLTYW NRFAAWALED EVPDAVRTLF EWLAANRPAE PVPGLSWGDA RIGNMMFGDD
FEVVGVMDWE QASLAGPMAD LGWWLHFDEI HSSFQGVPRL DGLGTRQETI DLWEELTGRR
VENLLWHEVF ACVKTALLGL HTRRSMRLPL AGRSERGPYL ERAYRLLDLD LEELS