| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0516 |
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| Symbol | |
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| ID | 5668935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 601149 |
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| End bp | 602132 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641239445 |
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| Product | luciferase family protein |
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| Protein accession | YP_001504883 |
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| Protein GI | 158312375 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03621] probable F420-dependent oxidoreductase, MSMEG_2516 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCTGACG CCCGGCCCTT CCGTTTCGCG GTCCAGACCA CAACCGCGAC GTCGGCCACC
GAGTGGCGCG ATCTCGCACG TCGGGTCGAG GACCTCGGCT ACTCGACCCT GTTCCTCGCC
GACCACTACC TCGGGCCAGG ACCAGTCAGC ACCCAGACGT TGCTGCGCCC GCAGCACCTT
GCCCCCATCG CCGCGATGGC CGCCGCCGCC GCCTGGACCT CGACGCTGCG GATCGGCTGC
CGGGTCTTCT GCGTCGACTA CCACATGCCC GCCGCGCTGG CGAAGGAGGC GGCGACCATA
GACCTGCTCT CCGACGGCCG CCTCGAGTTC GGCATCGGCG CCGGCACCAA CCAGGGCGAG
TACGAAGCCA TGGGCCTCAC CTTCCACGAG GCCCCCCAGC GCGTGTCCAA ACTCGAAGAG
GTCATCACCC TCGTCAAGGC GCACTGGTCA GGCGAGCCGA TCTCCATCGA CGGCGACCAC
ATCAGAGTCA GCGGATACGC CGGGCTACCG CGCCCGGTCC AGCGCCCTTG TCCTCGAATT
CTTATCGGCG GATCCCGGAA ACGGGTCCTA TCCCTGGCGG CGCGCGAAGC CGACATCGTC
AGCATGGCCA ACGTCCCCTG GCAGCCCCGC AACGACGCGG GACTCACCCC CGCGGAAGAG
GCACAGCGGC GGCACGACAT CGTCCGCGAC GCCGCCGGCG ACCGGTTCCC GCAACTGGAA
CTGGAGAGCT CGCCCTATCT GGTGTCCGTG CCCGAAGACG TCGACAGCGC CCTGGCCCAG
TGGTCAGCCC GGCTACGCAA GGCCATCCCA GAAGCCCAGC CAGACCTGCT GAGAAACCAT
CCGAACGTGC TCGTCGGCTC GCCCGATGAA ATCACCGACC ACCTACAGGA ACGCCGCGAC
CGCACTGGCG TCAACTACAT CACCATTCCC CGTGGGCAAA TCGACGAGTT CGCGCCCGTC
GTATCAGCGC TGACGGGCCG ATGA
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| Protein sequence | MADARPFRFA VQTTTATSAT EWRDLARRVE DLGYSTLFLA DHYLGPGPVS TQTLLRPQHL
APIAAMAAAA AWTSTLRIGC RVFCVDYHMP AALAKEAATI DLLSDGRLEF GIGAGTNQGE
YEAMGLTFHE APQRVSKLEE VITLVKAHWS GEPISIDGDH IRVSGYAGLP RPVQRPCPRI
LIGGSRKRVL SLAAREADIV SMANVPWQPR NDAGLTPAEE AQRRHDIVRD AAGDRFPQLE
LESSPYLVSV PEDVDSALAQ WSARLRKAIP EAQPDLLRNH PNVLVGSPDE ITDHLQERRD
RTGVNYITIP RGQIDEFAPV VSALTGR
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