| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0457 |
|---|
| Symbol | |
|---|
| ID | 5668878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 540826 |
|---|
| End bp | 541494 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641239388 |
|---|
| Product | insertion element transposase |
|---|
| Protein accession | YP_001504826 |
|---|
| Protein GI | 158312318 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3293] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCGC GTAAGACCTA CCCCAGCGAT CTGTCCGACG CCCGCTGGGA GCTGATCGCC
CCCACCCTGC GCACCTGGCA GAAGGCCCGG CTCGACCGCC GGCCCACCGG ACAACCCGCC
CAGGTCGACC TCCGCGAGGT ATTCAACGCA ATCCTCTACC TCAACCGGAC CGGCATTCCC
TGGAGATACC TGCCCCACGA CTTCCCGTCG CACAACACCG TCTACTTCTA CTACGCCGCC
TGGCGCGACG AGGGCATTCT CGCCCGGCTC GGCTACACCC TGACCAGCCT GGCCCGCGCC
GCCGAGGGCC GCGAGCCGGA GCCGACCGCG TGCATCCTCG ACACCCAGAC CGTCAAGACC
TCTACCGACG TTCCCCTTGC CAGCCAGGGC ACCGACGCCG GCAAGAAGAT CGTCGGCCGG
AAGCGGGGCG TGGTCACCGA CCCCCTCGGC CTGCTGCTCG CCGTGAACGT CACCGCCGCC
CACCTGTCCG ACAACGCTCT CGGCATACGC CTGCTCGACC AGGCCAAAAA CACCTGGCAG
TCCCTGTCGA AAACCTGGGT CGACAAGGGC TTCAAGAACA CCGTGGTCGA GCACGGTGCC
GCCCTCGGTA TCGATGTCGA GGTCGTTCCC AGAAAAACCG GGACCCGCGG CTTCCACGTC
GTCAAATGA
|
|---|
| Protein sequence | MSPRKTYPSD LSDARWELIA PTLRTWQKAR LDRRPTGQPA QVDLREVFNA ILYLNRTGIP
WRYLPHDFPS HNTVYFYYAA WRDEGILARL GYTLTSLARA AEGREPEPTA CILDTQTVKT
STDVPLASQG TDAGKKIVGR KRGVVTDPLG LLLAVNVTAA HLSDNALGIR LLDQAKNTWQ
SLSKTWVDKG FKNTVVEHGA ALGIDVEVVP RKTGTRGFHV VK
|
|---|
| |