| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0378 |
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| Symbol | |
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| ID | 5668802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 452989 |
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| End bp | 454416 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641239310 |
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| Product | diguanylate phosphodiesterase with GAF sensor(s) |
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| Protein accession | YP_001504750 |
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| Protein GI | 158312242 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.150373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0425607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGTTT TCGCTAGCGG GGCTGGGTCG CAGGACCCAC GTGACGGCCG TGACGGCCGT
GACCGTCGGC GTGGCCGGGA CCGTCGCGTC GGCGGACGGG TGCGCGAGCG TACCGACGAG
GTGGCCCGGG TGTTGGACCT GGCCCGCCGC CACCTCGGGA CGGACGTCGC CTGGCTGTCG
CGGTTCACCG GGGACGAACA GGTCATCGAC CTGATCTCCG GGGAGGGTGA GCTGGTCGAG
CGCCTGGTCG GCAGGCAGGT CGAGCAGGAG GCGACCTACT GCGCCCGGGT GCTGGACGGG
CGGCTGCCCG CCGTCATCCC CGACGCTCGG GCGGATCAGC GCACCGCCGC CCTGGCCGTC
ACCCGCGAGC TGGGCATCGG CTCGTACGTG GGCGCGCCTG TGTACCTCGA CAGCGGCGAG
GTCTACGGCA TGCTGTGCGC GCTGAGCACC GAGCCGGACC CGGGCCTGGG CGACCGCGAG
GCCCGCTTCC TGGGCCTGCT CGCCGACGTC GTGGCGGACG CGGTGTCCGC CCTGCACCGC
GGCGGGGCGG ACGACGACCA CATCCGGAGC GTGATCGCGC AGGTCATCGC CCGCGGCGGG
CCGGTGATGG TCTTCCAGCC GGTGTTCGAC CTGCCGACGC ACGGCCTCGT GGGCGCCGAG
GCGCTGGCCC GCTTCCCCAC CTTCCCCGCG CCGTCGGGGG AGCCGGCCGG GGACCTCGGT
GAGGAGACCG GTGACCAGGC TGGTGGGGCG GCCGGTGAGG AGGCCGACGA CCGCACCGCC
GCCGGCCCGT ACTTCGGTGA TCTTCCGCCG GACCGCTGGT TCGCGCACGC CGCGTCGGTC
GGGATGGGAA TCGATCTGGA GCTGGCGGCG ATCCGGGCCG CGGTCGCGGA GCTGCCCAGG
TTCCCGCGCG GGCTGTCGCT CGCGGTGAAC GCGTCCCCGG CGACCATCGC GTCCGGCCGC
CTCGGGGAGC TGCTCGCGGC CACGGCGACC GACCAGCTGA TCGTCGAGAT CACCGAACGG
GACGGCATCC ACGACCTGCC CAGCACGCTC GCCCGCCTCT ACGAGCTGCG GGAGATGGGG
GTACGGATCG CGGTGGACAA CGTCGGCGTC GCCTACGCGA GCCTGCGCCG GCTGGTGCAG
ATCCTGCCGG ACGTCGTGAA GATGAACCTC TGGCTGACCA CGGACATCGG TGCCGACGCG
GCGCGGCGCG CGCTCGTCGA GGCGCTCGTG CACTTCTCCC GGCAGATCGG GGCGTGTCTC
GTGGCGGAGG GCATCCAGAG GGCGAACGAG CTGCGCGTGC TGACCGCCGC CGGTGTGGAC
CAGGGGCAGG GCGAGTTCCT GGGCCCGCCG GGGCCGCTGC CGCTGCCCGT GCACGGCCGG
TGCGTCCCGG CGAGTCACGG GCCGCTGGTG TCCGCGCGCG CGTCCTGA
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| Protein sequence | MSVFASGAGS QDPRDGRDGR DRRRGRDRRV GGRVRERTDE VARVLDLARR HLGTDVAWLS
RFTGDEQVID LISGEGELVE RLVGRQVEQE ATYCARVLDG RLPAVIPDAR ADQRTAALAV
TRELGIGSYV GAPVYLDSGE VYGMLCALST EPDPGLGDRE ARFLGLLADV VADAVSALHR
GGADDDHIRS VIAQVIARGG PVMVFQPVFD LPTHGLVGAE ALARFPTFPA PSGEPAGDLG
EETGDQAGGA AGEEADDRTA AGPYFGDLPP DRWFAHAASV GMGIDLELAA IRAAVAELPR
FPRGLSLAVN ASPATIASGR LGELLAATAT DQLIVEITER DGIHDLPSTL ARLYELREMG
VRIAVDNVGV AYASLRRLVQ ILPDVVKMNL WLTTDIGADA ARRALVEALV HFSRQIGACL
VAEGIQRANE LRVLTAAGVD QGQGEFLGPP GPLPLPVHGR CVPASHGPLV SARAS
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