Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0247 |
Symbol | |
ID | 5668672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 301785 |
End bp | 302174 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641239177 |
Product | HxlR family transcriptional regulator |
Protein accession | YP_001504620 |
Protein GI | 158312112 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.402556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.678764 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCCGG ACACGCCCCA GCCCCCGAGC ACGGCGCGGC CCGGCCGCAG CTATCACTGC CACGTCGAGG TCACGGTCGA CGTCATCGGC GGGAAGTGGA CGCCGGTCGT CCTCGCCCAT CTGAAGGAAC ACGACCGGCT ACGGTTCGCA CAGCTGCGCC GGCTCATCCC CGACATCACC GAGAAGATGC TGGCGCAGCG GCTGCGGGAG CTCGAGGCGA TCCGGATCGT CGACCGGATA CCCGTCAGCA CGGCACCGCC GCACGTCGAG TACGCACTGA CGGCGCAGGG CCGGTCCCTC GGCCCGGTGC TGCAGGCGAT GTGGGAGTGG GGCCGGGACT GGGCGGCCAC GAACCGGCTC GCCGTCGATC CGGTCCAGTT CCGCCGCTGA
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Protein sequence | MSPDTPQPPS TARPGRSYHC HVEVTVDVIG GKWTPVVLAH LKEHDRLRFA QLRRLIPDIT EKMLAQRLRE LEAIRIVDRI PVSTAPPHVE YALTAQGRSL GPVLQAMWEW GRDWAATNRL AVDPVQFRR
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