Gene Franean1_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0247 
Symbol 
ID5668672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp301785 
End bp302174 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content71% 
IMG OID641239177 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001504620 
Protein GI158312112 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.402556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.678764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCGG ACACGCCCCA GCCCCCGAGC ACGGCGCGGC CCGGCCGCAG CTATCACTGC 
CACGTCGAGG TCACGGTCGA CGTCATCGGC GGGAAGTGGA CGCCGGTCGT CCTCGCCCAT
CTGAAGGAAC ACGACCGGCT ACGGTTCGCA CAGCTGCGCC GGCTCATCCC CGACATCACC
GAGAAGATGC TGGCGCAGCG GCTGCGGGAG CTCGAGGCGA TCCGGATCGT CGACCGGATA
CCCGTCAGCA CGGCACCGCC GCACGTCGAG TACGCACTGA CGGCGCAGGG CCGGTCCCTC
GGCCCGGTGC TGCAGGCGAT GTGGGAGTGG GGCCGGGACT GGGCGGCCAC GAACCGGCTC
GCCGTCGATC CGGTCCAGTT CCGCCGCTGA
 
Protein sequence
MSPDTPQPPS TARPGRSYHC HVEVTVDVIG GKWTPVVLAH LKEHDRLRFA QLRRLIPDIT 
EKMLAQRLRE LEAIRIVDRI PVSTAPPHVE YALTAQGRSL GPVLQAMWEW GRDWAATNRL
AVDPVQFRR