| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0153 |
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| Symbol | |
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| ID | 5668578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 181053 |
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| End bp | 182849 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641239082 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001504526 |
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| Protein GI | 158312018 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0060166 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAGCCGG GAAGCACGCT CACCGAAGGA CTCAGCCGCC TGCGTGCGAC CATTCGCCGC
GACGGCGCGC AACAGTCCGG GCTGTCCTCG CTGACCGAGT TGTCTTTCGT CAACGCGGCG
GGCGACGCGC TCGTCACGGT GGCGCTGGCC GGCTCGCTGT TCTTCGCGGT GCCGACCGGC
GAGGCCCGGT CCAAGGTGGC ACTTTACCTA CTGATCACGA TGGTGCCGTT CGCCCTGCTC
GCACCGGTCG TGGGGCCGCT GCTGGACAGA GTGGCCTACG GGCGGCGCAC CGCGCTCGCG
GCCATCTGCC TTGGGCGGTG CCTGCTGGCC TGGCAGCTGG CCGGCGCCCT GGACGGGCTC
GCGGTCTACC CGCTCGCCCT CGGGCTGCTC GTCCTGTCGC GGGCGTTCGG CGTCGCCCGC
AGCGCCGTCG TGCCGCGAGT CACGCCACCC GAGATGACCC TGGTCAAGGT CAACTCCCGG
ATCTCCCTGG TCAACATCGT CGCCGGCGCG GTCGTCGCCC CGCTCGGCCT CGGGCTGGCC
AACATCCCGT TCGTCGGCTA CCCGTGGGTT CTGCGGGTGT GCGCGCTGAT CTACATGGCC
GGGGTGCTGC TGGCCTTCAA CCTGCCCGGC CACGTCGACT CCGCGGCCGG TGAGCGGACG
CTGCGCGAGC TCACCGGCCC GCGCCGGCGG GGCAACCTGC GCACCCGGTT CGCCGCGGCG
CTCGGCGCGC TGCCCGTCGC GTTGCGGGCG ACGCTGGTCC TGCGCGGACT GGTGGGCTTC
CTCACCTTTT ACCTGGCATT CCTGCTGCGG ACGAACGGCG GCAACAACCT GTGGCTCGGC
GCCCTCGCGG CGACGGCGGG ATTCGGCAGC GGAATCGGCG TCCTCATCGG CGGGCGGCTC
GGGCGCCGGC GTCCCGAGGG AATTCTCATG CTGGGCCTGC TGCTGGCGGC GAGCGGATGC
CTCGTCGCCG CGGTGACGTA CACCCGGTTC ACCTCGCTGG TCGCGGCCCT GCTGGCGATG
ACGGCGGGCT CGATGGCCAA GCTGGCGCTG GACGCCATAA TCCAGCGCGA CATCGTCGAG
GACACCCGGG GCTCGGCCTT CGCCCGCTCC GAAACGGCGC TGCAGCTCGG CTGGGTGACC
GGCGGCGCGT TCGGGCTGAT CGAGATGCCG GGCACGCTCG GCTTCGCGCT CGCCGCGGCG
GCGGTCGGGC TGGCCCTCGT CCTGCAGTCC CGGGCGCTGC GGGAGGCCCG CCGCCAGGCC
CGCGAGCGCC ACCGGCCCAC GGCCCGGGAG ACCACCGGCG CCAAGCCGCC GTGGCCGGGC
CCGCAGGCAC CGGCGCAGCC GTCCGCGCCC GTCGCCGACA CCGTTCCCGC GCCGGCCGGC
TACGCGACAA CCGGCTATGC GACAACCGAC CGCGCTGTCG CCGATCCCAC AGCGACCGAC
CCCACCGCGG TCGGTCCCCC ACCGGTCAGC CCCGCGGGTG CGGGTGCAGT GCCCACGGGT
TCCATGAACG GCTGGTATGC CCCCGATCCG CGGGCCGACG TCCCGGTCAG TTGGCGGGGG
CCCGCCGGCG GCGGGCAGCG AGCCGGCGGC GATCCCGACG CTACGAACCC GCTGGGGCAC
CCGCCCGTCC CCGGGCCGGC GGCGGCAGAG GGCCCGGGCG GCGCGTACGG CCCGGCACCG
CAGCTGCACC ATGCCTACCA GCAGCCCACC CCCGCGGTGC CGCGGACGCT GGAGGATCCC
GACCCTCCGA ACGGCTCCGC CCGCCGCGGT CGCTGGCGCC GCGACCGGCC ACGATAG
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| Protein sequence | MKPGSTLTEG LSRLRATIRR DGAQQSGLSS LTELSFVNAA GDALVTVALA GSLFFAVPTG
EARSKVALYL LITMVPFALL APVVGPLLDR VAYGRRTALA AICLGRCLLA WQLAGALDGL
AVYPLALGLL VLSRAFGVAR SAVVPRVTPP EMTLVKVNSR ISLVNIVAGA VVAPLGLGLA
NIPFVGYPWV LRVCALIYMA GVLLAFNLPG HVDSAAGERT LRELTGPRRR GNLRTRFAAA
LGALPVALRA TLVLRGLVGF LTFYLAFLLR TNGGNNLWLG ALAATAGFGS GIGVLIGGRL
GRRRPEGILM LGLLLAASGC LVAAVTYTRF TSLVAALLAM TAGSMAKLAL DAIIQRDIVE
DTRGSAFARS ETALQLGWVT GGAFGLIEMP GTLGFALAAA AVGLALVLQS RALREARRQA
RERHRPTARE TTGAKPPWPG PQAPAQPSAP VADTVPAPAG YATTGYATTD RAVADPTATD
PTAVGPPPVS PAGAGAVPTG SMNGWYAPDP RADVPVSWRG PAGGGQRAGG DPDATNPLGH
PPVPGPAAAE GPGGAYGPAP QLHHAYQQPT PAVPRTLEDP DPPNGSARRG RWRRDRPR
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