Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4494 |
Symbol | |
ID | 3907470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 5366291 |
End bp | 5367436 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637881826 |
Product | peptidase M50 |
Protein accession | YP_483569 |
Protein GI | 86743169 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGGCGA CCTTCGTGGT GGGACGGATC GCTGGAGTCC GGATCGGGGT CCACTGGAGC GTGCTGCTCA TCTTCGGCAT CATCGCGTTC GGCCTCGCGC AGGGCCGCCT CCCACAGGCC TACCCGGGCC ATGCCCTGGT GGTGTACTGG GTGGCGGCTC TTGCCGCCGC AGTGGTTTTC TTCGCCTCGC TGCTCGCCCA CGAGGTGGCG CACGCCGTGG TGGCCCAGCG CAACGGGGTG GCCGTGGACG ACATCGTGTT GTGGCTGCTG GGCGGGGTGG CCCGGCTGAA GTCGGAGGCG TCGAGCCCGG CAGCGGAGCT GCGGATCGCT GGTGTCGGCC CACTCGTCAG CCTCTTGCTG GGCGGGCTCT TCGTGCTGGG CGCCTGGCTG CTCGCCCTGG CGTCCGCGCC CGAACTCCTG ATCGAGGTGG TGGCCTGGCT GGCGGGCATC AACCTGCTGC TCGCCGTCTT CAACGCCTTT CCCGCCGCTC CGCTCGACGG TGGGCGGCTG CTGCGCGCCT TCCTGTGGTG GCGTACGGGA GATCGGCTGC GGGCGACCGC CGGGGCCACC GCGGCCGGAC GCGTCCTCGG CTGGCTGCTC GTCGTTCTGG GACTCCTCGT GTTCATGAGA GGCGGCGGAT TCGGCTGGCT CTGGCTGGCC CTGATCGGCT CGTTCCTCAT CGCGGCCGCC ACCGCCGAGG GACGGCAGGC GCAGTTGCGC GGTGTGCTCG CCGGCGTCCC GGTACATGAC GCCATGACGA CGAAACCGCT CACGGTGCCC GCGGCCCTGA CCGTCGCGGA CCTGCTGGCC GGCCCGCTGT ACCGGTACCG GCACTCGGCG TTCCCGGTGA CCGGCGAGAA CGGAGCCCCG GTCGGGCTGG TGACCCTGGA CGGCGCCAAG CAGGTGCCGC CGGAGAAGAG CGGCACGGTA ACGGTAAGCG AGGTGATGGT GCCACTGTCG CGGACCACCA TCGCGGGTCC CGACGACCCG CTGGCGGATC TGCTGCCGCG CATGGAGCCC GGCGCCGAGC ACCGCGTCCT GGTGATGGAT CAAGGCAGAC TCGTCGGGAT CCTGTCCCTG TCGGACATCA GCCGCACGGT GACGTGGCTG ATGAACGCCG CCCCCGGGCC GCGCGAAGTC CCGTGA
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Protein sequence | MRATFVVGRI AGVRIGVHWS VLLIFGIIAF GLAQGRLPQA YPGHALVVYW VAALAAAVVF FASLLAHEVA HAVVAQRNGV AVDDIVLWLL GGVARLKSEA SSPAAELRIA GVGPLVSLLL GGLFVLGAWL LALASAPELL IEVVAWLAGI NLLLAVFNAF PAAPLDGGRL LRAFLWWRTG DRLRATAGAT AAGRVLGWLL VVLGLLVFMR GGGFGWLWLA LIGSFLIAAA TAEGRQAQLR GVLAGVPVHD AMTTKPLTVP AALTVADLLA GPLYRYRHSA FPVTGENGAP VGLVTLDGAK QVPPEKSGTV TVSEVMVPLS RTTIAGPDDP LADLLPRMEP GAEHRVLVMD QGRLVGILSL SDISRTVTWL MNAAPGPREV P
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