| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4377 |
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| Symbol | |
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| ID | 3907351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 5225964 |
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| End bp | 5227664 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637881708 |
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| Product | L-aspartate oxidase |
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| Protein accession | YP_483452 |
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| Protein GI | 86743052 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0029] Aspartate oxidase |
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| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.342641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGTGC TACCTTGCCG GCTCGGCGCG CCCCGCCCGG GATGGATGCG CGCCGCGGAC
GTCGTCGTCA TCGGTTCGGG CATCGCCGGG CTCACGACGG TCCTGCACCT GCGCCGGGCG
CTGCCCGCCG CCCGGGTGCT GCTGGTGACC AAGGCGCACC TCGACGCCGG GTCGACCCGG
TGGGCGCAGG GTGGGATCGC CGCCGCGCTC GCCGCGGAGG ACTCGCCCGA TGATCATCTT
GCCGACACCC TGGTCGCCGG CGTCGGGCTG TGCGACGAGG ACGCAGCCCG AGTGCTGGTC
CGCGACGGAC CGGCGCGGGT GCGTGAGCTC GCCGAGCTCG GCGCCCGGTT CGATCGGACC
ACCGACGGCT CGTTCGCCCT CACTCGGGAG GGCGGCCATC TGCGCAACCG CATCATCCAT
GCGGGTGGGG ACGCCACCGG CCTGGAGGTG GAACGCGCCC TGATCACCGC CGTCCGGGCC
GATGAGAGCA TCGAGGTCAT CGAACACGCC CTGGTCCTCG ACCTGCTGCT CGACTCCGAC
GGCCGGGCCG CCGGCGCTAC CCTGCACGTG CTGGGGGAGG GCAGCCGGGA CGGCGTCGGC
GCGGTGACGG CGGGCGCGGT GGTCCTGGCG ACCGGCGGGA TGGGGCAGAT CTTCGCGTCG
ACGACCAATC CCGGCGTCTC CACCGGGGAC GGGGTGGCGC TGGCTCTGCG CGCGGGCGCC
GTCGTCGCGG ACCTGGAGTT CGTCCAGTTC CACCCGACCG CCCTGTGGCT ACCCCCGTCC
AGGCCGGGCG CCGTCGCCGA ACTGCTCGGG GGCCAGCAGC CACTGGTCAG CGAGGCCATG
CGGGGGGAGG GTGCCGTTCT CGTCGACGCG GCCGGCGAAC GGGTGATGGC GGGCGTCCAT
CGGCTGGCCG ACCTCGCGCC GCGCGACGTC GTCGCCAAGC AGATGTCGCG GGTCATGGCG
GCCCAGGGGG TCGATCACCT GTTCCTGGAC GCCCGGGGGC TGGGCGCGGC GACCATCGAG
CGGCGGTTTC CCTCGATCAC CGCGCGCTGC CGGTCCGCCG GCATCGATCC GGTCGCCAGG
CCGATCCCCG TCGCGCCGGC CGCCCACTAC GCCAGCGGCG GGGTGCGCAC GGATCTGTGG
GGCCGCACGA GCGTGGCCGG CCTGTACGCC TGCGGGGAGG TGGCCTGCAC CGGGGTGCAC
GGCGCCAACC GGCTCGCGTC GAACAGCCTG CTGGAGGGGC TGGTCTTCGC CGCACGCATC
GCGGAGCACC TGGCCGGCAC AGCGCCCGGC GGCCGGCACC GCGTCGCCAT CCCCGCCGCG
CCGGTGGTCG GTCGCGGCAG TGGTCTGACC GACCCCGCCG AACGCGCGGA GCTCGCGCGC
GCGATGACCG ACGGTGCCGG GGTGCTGCGC AGCGCGGACA GCCTGCGGGC GACGGCGAAG
GTACTGGCCG GTCTCGGGGA CCTGCGGGTC AGCGGGGCGA CGGTCACGGC CGGGCCGCCG
GCCTGGGAGA TGACCAACCT GCGCACGGTT GCGACGGCCC TCGCCGCCGC CGCCGCCAGC
CGGACGGAGA CCCGCGGGTC CCATTGGCGA GAGGACTTCG GTGAGCGGGA CGACGAACAC
TGGCTCGGCC GGATCCTCAC CCGGCTCAAT CCAGAAGGGG AACTGATCGT GGACGTCGAG
CCCATGCGCG GCTCGCGGTG A
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| Protein sequence | MTVLPCRLGA PRPGWMRAAD VVVIGSGIAG LTTVLHLRRA LPAARVLLVT KAHLDAGSTR
WAQGGIAAAL AAEDSPDDHL ADTLVAGVGL CDEDAARVLV RDGPARVREL AELGARFDRT
TDGSFALTRE GGHLRNRIIH AGGDATGLEV ERALITAVRA DESIEVIEHA LVLDLLLDSD
GRAAGATLHV LGEGSRDGVG AVTAGAVVLA TGGMGQIFAS TTNPGVSTGD GVALALRAGA
VVADLEFVQF HPTALWLPPS RPGAVAELLG GQQPLVSEAM RGEGAVLVDA AGERVMAGVH
RLADLAPRDV VAKQMSRVMA AQGVDHLFLD ARGLGAATIE RRFPSITARC RSAGIDPVAR
PIPVAPAAHY ASGGVRTDLW GRTSVAGLYA CGEVACTGVH GANRLASNSL LEGLVFAARI
AEHLAGTAPG GRHRVAIPAA PVVGRGSGLT DPAERAELAR AMTDGAGVLR SADSLRATAK
VLAGLGDLRV SGATVTAGPP AWEMTNLRTV ATALAAAAAS RTETRGSHWR EDFGERDDEH
WLGRILTRLN PEGELIVDVE PMRGSR
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