Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4336 |
Symbol | |
ID | 3907306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 5178041 |
End bp | 5178466 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637881665 |
Product | PilT protein-like |
Protein accession | YP_483411 |
Protein GI | 86743011 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.586249 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCTTCC TACTCGACAC CAACGTCATC TCCGAGCTCC GTAAGCCCGC GAAACGCCGC GATGACCGCT TCAACGGCTG GGCCGCGAGC CTGTCACCAT CGGATACCTT CCTCTCCGTC ATCACCCTGC TAGAGCTGCG GGCTGGCATT GAGAACAAGC GATGGCGCGA TGCCCGCCAG GCGGCCGTCC TGGACTCATG GCTCGATCAG AACGTGCTCC CGGCATACGC AGGCCGGCTG CTCGACGTCG ATCAGATCGT CGCCGGCTCG GCGGCGCGAC TTCACGTGCC CGACCGGCGC CCAGCCCACG ATGCGCTCAT CGCCGCCACG GCCCAGGTGC ACAGCCTCAC GCTCGTCACC CGCAACGAGG CCGACTTCGC CGCCATGGAC GTCCCACTCG TCAACCCTTG GACCTCCCAG CTGTAA
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Protein sequence | MSFLLDTNVI SELRKPAKRR DDRFNGWAAS LSPSDTFLSV ITLLELRAGI ENKRWRDARQ AAVLDSWLDQ NVLPAYAGRL LDVDQIVAGS AARLHVPDRR PAHDALIAAT AQVHSLTLVT RNEADFAAMD VPLVNPWTSQ L
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