Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4290 |
Symbol | |
ID | 3907258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 5120560 |
End bp | 5121462 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637881617 |
Product | NUDIX hydrolase |
Protein accession | YP_483365 |
Protein GI | 86742965 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGC TGCCAGCCAA CGCCGACGGC GCCTTCGACA CCGACGGGAC TACCGTCCCC CCGCCCCCGG CCTGGCTGCG CGCTCTGGCG GAGAAGGCCG GGCAGGCCCT CGTGACCAGC CGGACCCATC CGGGTCATGC AGGCGCGGAT GCTCGACCGG CCGCCGTACT CATCCTGTTC GGCGATGATG GCCCGGAGGG GCCGGACATC CTCCTGCTCG AACGGGCGGC CGAGCTGCGC AGCCATGCCA GCCAGCCCGC GTTCCCCGGT GGCGCCACCG ACGCGACAGA CGAGTCGCGG GTGCACACGG CGCTACGCGA AGCCGAGGAG GAGGTAGGGC TCGACCCCGC GGGGGTCGAG GTGCTCGCCG TCGCATCCCC GCTCTACCTG CACGCCAGTC GTTATCTCGT GACCCCGGTG ATCGGCTGGT GGCATACTCC GTGCGCGGTC GTACCCGTCG ATCCCGCCGA GACGTCGTCG GTCGCCCGGG TGCCACTCGC GGAGCTGGCC GACCCGGCCA ACCGGGTCAT GCTGCGCCAC CGCACCGGCC TCGCCGGACC CGCCTTCCGG GTCCGCGGCA TGCTGGTGTG GGGCTTCACC GCGGGCATCC TCGATGTTCT TCTCCGTCTC GGCGAGTGGG AACGGCCGTG GAACGACACC GAGCTCATCG ACTACCCGGT CGCGCGGGCC ACGACCAGCG GGACCCCGGT CGTGCCCGCA CAGACGACCA GCCCACCGGC ACCGTCCCAC CCACCGGCAC CGTCCCACCC ACCGGCACCG TCCCACCCAC CGGCACCGTC CCACCCACCG CTACAGTCCG GTCCACTGGA CAAGTCCCCG CCACTGGACA AGTCCAGCCC GCCGGCGGCA CCGGCATCGC CCTGCGACGA GAGGCACAGC TGA
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Protein sequence | MTELPANADG AFDTDGTTVP PPPAWLRALA EKAGQALVTS RTHPGHAGAD ARPAAVLILF GDDGPEGPDI LLLERAAELR SHASQPAFPG GATDATDESR VHTALREAEE EVGLDPAGVE VLAVASPLYL HASRYLVTPV IGWWHTPCAV VPVDPAETSS VARVPLAELA DPANRVMLRH RTGLAGPAFR VRGMLVWGFT AGILDVLLRL GEWERPWNDT ELIDYPVARA TTSGTPVVPA QTTSPPAPSH PPAPSHPPAP SHPPAPSHPP LQSGPLDKSP PLDKSSPPAA PASPCDERHS
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