| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4258 |
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| Symbol | |
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| ID | 3907225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 5079510 |
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| End bp | 5080967 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637881584 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_483333 |
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| Protein GI | 86742933 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACC AGCGGACTAA CGTTGCGTCC ATGGCATCCA CTCGCCCGTC GGCCGGCGGT
CGCCCGTCGA GTCGTGCGGC CTCAGGCGGG TTCCGGTGTA ACAGCTGCGG CTCGGAGTCC
GTGCGGTGGG CGGGACGATG CTCGCGCTGC CAGGAGTGGG GCACGCTGGA GGCCCAGGCC
CCCGCCCCAC GCCGGGGGGC CGGCCTGGTC GCGGGGGGTC GTTCCGCCTC GTCCGCCGCA
GTGACGGCAC CGGCTCTGCC GGTCATGTCC GTTGACGTGA CCGCGACGCG GCGTCGTCCG
ACCGGGATCG ACGAACTCGA CCGCGTGCTG GGCGGCGGCC TCGTTCCCGG CGCCGTGATC
CTGCTCGCCG GGGAACCGGG GGTCGGCAAG TCCACCCTAT TACTGGAGGT CGCGGCCCGC
AGCGCCGCCG CCGGTGCCCG CGCCCTGGTC GTCACCGGGG AGGAATCCGC GGCGCAGGTC
AGGCTGCGGG CGGGTCGGAC GGGTGCGCTG CACGAGGACC TGTGGATCGC CGCCGAGACG
GACCTCGGCG CCGTCCTGCG TCACGTCGAG GAGGTCTCAC CGGCCCTGCT GGTGGTCGAT
TCGGTGCAGA CCATCTCCGC GGCCGGGGTG GACGGAGCCG CGGGCGGGGT CACCCAGGTC
CGTGAGGTCA CCGCGGCCCT GATCCGGACG GCCAAGGCGC TGGGACTCGT GACGGTGCTT
GTCGGCCATG TCACGAAGGA TGGCCTGGTC GCCGGACCAC GCCTCCTGGA ACATCTGGTC
GACGTGGTGC TGCACTTCGA GGGCGAGCGG CACTCCGCAC TGCGCCTGGT CCGCGCGGGC
AAGAATCGGT ACGGACCAGC CGACGAGGTC GGCTGTTTCG AGATGGACGA TTCCGGTATC
CATGGCATCG CCGACCCGAG CGGGCTGTTC CTGTCCCGGT CCAGCGGCGC GGGGCTGGAG
GCGGTGCCGG GAACCTGTGT CACCGTAACG GTTGAGGGCC GACGGCCACT CGTCGCCGAG
GTTCAGGCCC TGGTGGCGGA AACCTCGGCG CAGATCCCCC GGCGCGCCGT GTCCGGGCTC
GATCCGGCCC GGGTGGCGAT GATTCTCGCC GTGGTCGAGC GCCGGGCGAA GGTGCGCTTC
GGCCGGGCCG ACGTGTACGC CGCGACCGTC GGCGGGGTTC GGTTGGCCGA GCCCGCGGCG
GACCTCGCGA CGGCCTTGGC GATCGTCAGC GCGGCCAGGG ACCGTCCGTT GCCGGCCGAT
CTCGTCGCCA TCGGCGAGGT CGGCCTGGCC GGGGAGGTCC GCGCGGTGGG CTCGGTACGC
CAACGGCTCG CCGCCGCGGC CCGGCTCGGC TTTCGCCGGG CGCTCGTTCC GGCGGACCCC
GGCCCGGCTC CGGACGGCAT GAAAGTCACC GAGGTACCCG ACCTGATCGG CGCGATCAGC
AAAATGCATG AAACATAG
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| Protein sequence | MSDQRTNVAS MASTRPSAGG RPSSRAASGG FRCNSCGSES VRWAGRCSRC QEWGTLEAQA
PAPRRGAGLV AGGRSASSAA VTAPALPVMS VDVTATRRRP TGIDELDRVL GGGLVPGAVI
LLAGEPGVGK STLLLEVAAR SAAAGARALV VTGEESAAQV RLRAGRTGAL HEDLWIAAET
DLGAVLRHVE EVSPALLVVD SVQTISAAGV DGAAGGVTQV REVTAALIRT AKALGLVTVL
VGHVTKDGLV AGPRLLEHLV DVVLHFEGER HSALRLVRAG KNRYGPADEV GCFEMDDSGI
HGIADPSGLF LSRSSGAGLE AVPGTCVTVT VEGRRPLVAE VQALVAETSA QIPRRAVSGL
DPARVAMILA VVERRAKVRF GRADVYAATV GGVRLAEPAA DLATALAIVS AARDRPLPAD
LVAIGEVGLA GEVRAVGSVR QRLAAAARLG FRRALVPADP GPAPDGMKVT EVPDLIGAIS
KMHET
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