Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4172 |
Symbol | |
ID | 3907137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4974958 |
End bp | 4975638 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637881500 |
Product | hypothetical protein |
Protein accession | YP_483249 |
Protein GI | 86742849 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.819256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCAATT CTCTGCCGGA GGAACCGATG CACATTCACC CGACCGCTCC CTCCCAATCC TCGGCCGACG AGGAATACCT GCCGGTGCCT TGGGCGGTCC TGGAGAGCTA CCGCTGCTTC GGCTGCTCAC CGCACAACGC AAACGGCCTG CGCCTCCGCT TCGCCTTCCG TCCCGACGGG ATCGCCACCC GCTTCAGGCT GGACCGCACT CACGAGTCGT ACCCGGGGGT CGTGCACGGC GGTCTCATCG GAGTCATCTG CGACGAAACC ATGGGAAACC TGATCGTTCT GCGAACAGGC CTCACCTCCT TCACCACCGG GATGCGGCTG CGGTACGTCA CCGCGATGCG GGTGAACACC GACTACCAGT GCGTCGCCCG CCTACAGGCC GGCACGGCTG AGCCGGTCTC CAACCCGACG GGCGGTCCGA CGGGCGGTCC GACGGGCGCG GGCGGCCTGG TGCGTGCCGA GGCCGAGATC CTCGACGCCG CGGGCAGTCT GGTGGCTGCG GCGAGCGCGA CCTACCGTCC GACATCGATG AACATCGCGC GGCAACGCCT GGACCTGCGA CCGGACGAGT TCGACCGTGT CGCGGAAGCC ATCACCGCGG CCCAGGCCGC CCAGGCTGCT AACGCTGTCC AGGCTGCTAA CGCGGCCCAG GCCGTCGGCG GTCAGGGCTG A
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Protein sequence | MTNSLPEEPM HIHPTAPSQS SADEEYLPVP WAVLESYRCF GCSPHNANGL RLRFAFRPDG IATRFRLDRT HESYPGVVHG GLIGVICDET MGNLIVLRTG LTSFTTGMRL RYVTAMRVNT DYQCVARLQA GTAEPVSNPT GGPTGGPTGA GGLVRAEAEI LDAAGSLVAA ASATYRPTSM NIARQRLDLR PDEFDRVAEA ITAAQAAQAA NAVQAANAAQ AVGGQG
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