Gene Francci3_4172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4172 
Symbol 
ID3907137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4974958 
End bp4975638 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content69% 
IMG OID637881500 
Producthypothetical protein 
Protein accessionYP_483249 
Protein GI86742849 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.819256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAATT CTCTGCCGGA GGAACCGATG CACATTCACC CGACCGCTCC CTCCCAATCC 
TCGGCCGACG AGGAATACCT GCCGGTGCCT TGGGCGGTCC TGGAGAGCTA CCGCTGCTTC
GGCTGCTCAC CGCACAACGC AAACGGCCTG CGCCTCCGCT TCGCCTTCCG TCCCGACGGG
ATCGCCACCC GCTTCAGGCT GGACCGCACT CACGAGTCGT ACCCGGGGGT CGTGCACGGC
GGTCTCATCG GAGTCATCTG CGACGAAACC ATGGGAAACC TGATCGTTCT GCGAACAGGC
CTCACCTCCT TCACCACCGG GATGCGGCTG CGGTACGTCA CCGCGATGCG GGTGAACACC
GACTACCAGT GCGTCGCCCG CCTACAGGCC GGCACGGCTG AGCCGGTCTC CAACCCGACG
GGCGGTCCGA CGGGCGGTCC GACGGGCGCG GGCGGCCTGG TGCGTGCCGA GGCCGAGATC
CTCGACGCCG CGGGCAGTCT GGTGGCTGCG GCGAGCGCGA CCTACCGTCC GACATCGATG
AACATCGCGC GGCAACGCCT GGACCTGCGA CCGGACGAGT TCGACCGTGT CGCGGAAGCC
ATCACCGCGG CCCAGGCCGC CCAGGCTGCT AACGCTGTCC AGGCTGCTAA CGCGGCCCAG
GCCGTCGGCG GTCAGGGCTG A
 
Protein sequence
MTNSLPEEPM HIHPTAPSQS SADEEYLPVP WAVLESYRCF GCSPHNANGL RLRFAFRPDG 
IATRFRLDRT HESYPGVVHG GLIGVICDET MGNLIVLRTG LTSFTTGMRL RYVTAMRVNT
DYQCVARLQA GTAEPVSNPT GGPTGGPTGA GGLVRAEAEI LDAAGSLVAA ASATYRPTSM
NIARQRLDLR PDEFDRVAEA ITAAQAAQAA NAVQAANAAQ AVGGQG