| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4124 |
|---|
| Symbol | |
|---|
| ID | 3907089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 4926107 |
|---|
| End bp | 4927405 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637881452 |
|---|
| Product | recombinase |
|---|
| Protein accession | YP_483201 |
|---|
| Protein GI | 86742801 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCCGCC CGGACTACGC GGAACTGTTG GCGGACCTGC GGTCAGGGTT TCTGGACGGG
GCGATCGTGT GGGACCTGGA CCGTCTCACC CGGGACCTCC GCGACCTGGA AGACGCCATC
GAAGTCGTCG AGCTGTACGG CCGCCCGATC GTCGGGCCCG GTGTCGACCT GACCACCGAG
TACGGGAAGG CGAACGCCCG CGCGCAGGCG GTCGCGGCGA ACAAGGCCAG CGCGGACACC
TCCCGCCGGG TCCGCCGGTC CCACAAGCAG CGCGCCGAAC GCGGGGTGCC GGTCGGGGGC
AGCCGTCCGT TCGGCTGGAA GGACGACAAG CGGACGTTGG ATCTCACCGA GGCCGCGATC
CTGCGGGAAG GGGCCCGCCG GATCCTCGCC GGGGTGCCGG TCGTCGATCT GGTGAACGAG
TGGAACGCCG CCGGTGTCCG GGGGACCCGG GGGAAGAAGT GGACCAAGAG CAGTGTGTTG
AAGGTCTACC GCAACCCGCG GATCTGCGGC CTCCGCAGCC GGGGTGTGGA GGAACCGAAC
ATCAACGGCC AGGTCGCGAA GTACATGCAG GTCGTCACCC GCAAGGAACG CACCCCGGAC
GGGCGGACGA TCGAGGTGCC GGTGAAGGGC CAGTGGAAAG CGATCATCGG TGTGCGCCGG
TGGGACCAGG TGATCGCGAA GATCGGGGAC CGGACCTATG CCCAGCAGGG GCATAACTCT
CGCCGCTACC TGCTCAGCGG TGTGGTGGCG TGTGGCCGGT GTGGCCGGTC AATGTTCGGG
TCACCGCCGT ACCGGGAACG TAAGCACGCG ATCTACCGGT GTCCCGCTCC GACACAGGGC
GGATGCGGGA AAGTCTCCCG CCACGGACCC CACACCGATG ATCATATTCT GGCGGCGTTG
TTCCACAAGA TCGAGCTGGA GACCGCGAGC GCTGTCGTCG ACGTCGCCCC CTGGACGGGA
GAAGCCGCGT TGGCCGAGGT CCAGGAGAGC ATCACCGAGA CACGCGCCGC GTGGACGTCG
GTGCCCCGGC GGATTTCCCC GAAGGACTAC TTCCCGACCA TGGAAGACCT CCGAGCCCAG
GAAGAAATCC TGCTGAGGGA ACGCAACGAT CATCTGGTGG CCACGGCGAA CGCGCACGCC
CGCCCCGCCG ACGTCCGCGC CGAGTGGGAC GGCTACTCGT TGGCCCGCCA GCGCGCGATC
ATCAAAGAGC ATCTGATTGC CGTGGTCGTT CACCCTGCCG GCCGGGGCCG CCGGTTCGAC
CCCGACCTGT TGGACCCGGT CTGGCGGGAG GAGACCTAA
|
|---|
| Protein sequence | MIRPDYAELL ADLRSGFLDG AIVWDLDRLT RDLRDLEDAI EVVELYGRPI VGPGVDLTTE
YGKANARAQA VAANKASADT SRRVRRSHKQ RAERGVPVGG SRPFGWKDDK RTLDLTEAAI
LREGARRILA GVPVVDLVNE WNAAGVRGTR GKKWTKSSVL KVYRNPRICG LRSRGVEEPN
INGQVAKYMQ VVTRKERTPD GRTIEVPVKG QWKAIIGVRR WDQVIAKIGD RTYAQQGHNS
RRYLLSGVVA CGRCGRSMFG SPPYRERKHA IYRCPAPTQG GCGKVSRHGP HTDDHILAAL
FHKIELETAS AVVDVAPWTG EAALAEVQES ITETRAAWTS VPRRISPKDY FPTMEDLRAQ
EEILLRERND HLVATANAHA RPADVRAEWD GYSLARQRAI IKEHLIAVVV HPAGRGRRFD
PDLLDPVWRE ET
|
|---|
| |