Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4060 |
Symbol | |
ID | 3907021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4856346 |
End bp | 4858697 |
Gene Length | 2352 bp |
Protein Length | 783 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637881389 |
Product | hypothetical protein |
Protein accession | YP_483139 |
Protein GI | 86742739 |
COG category | [R] General function prediction only |
COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTACTC CGCTCGTGGC GCTCGTGACG CGCCGCCCGC GTCTGGTCCT CGTCCTTACG CTCCTCGTGC TGCTCGGCGC CGGTGGGCTC GCGGGCGGTG CCTTCGGCAA ACTCCAGACG GGGGGGTTCG ACGATCCAGC GTCGGACTCC TCCCGAGCCG AGGACGTCCT GGACGCCCGC TTCCACGGCC GCCCGAACCT CCTCCTGTTG GTGACCGCCC GGGCGGGCGA TGTCGACGAC GCGGCGGTCG TCGCCGCGGG GAAGGAGGTT GCGGCCGATC TCGCCGCCCA GGCCGGGGCG AGGGACGTCG TGTCCTACTG GACGGGGGGC GGTCCGGCGC TGCGCTCGCG GGACGGTCGG CAGGCGCTCG TCGTCGCCAG TGTCCAGGAC GATGACCAGG CCGCCGACAT CGTTGATCAT TATGGGTCGT GGGCGGACGC GCCGGGGGCG GTGACGGTCC GACCGGGTGG GGCCGCGACG GTCGGGGAGG ACATCAGCGG ACACGTCTCG GCCGACCTCG CCGCCGCCGA GTCGTTCGCC ATTCCCATCA CGTTGGCGTT GCTGGTCATC GCGTTCGCGG GCGTGGTCGC CGCCCTGCTG CCGCTGGGTA TCGGGCTGCT CGGCATGCTG GGTGGCTTCG CCGCGCTTTC GGTGATCGGT GAGCTTACCG ACGTGTCGAT CTTCGCGGTG AACCTGGCGA CGGCCCTCGG CCTGGGGCTG GGCATCGACT ACTCGTTGCT GATGGTCAGC CGGTTCCGGG AGGAACTGGC GGCGGGTCGG GACCGCGCCA CCGCGGTGGA GGGGACGGTC CGCTCGGCCG GCCGGACGAT CCTGTTCAGT GGGGCGACGG TGATCGTGGC ATTGGCCGTG ATGCTCGTCT TCCCGCCGTT CTTCCTGAAG TCGATGAGCT ACGCCGGGAT CTCGGTGACC CTCGTCGCGA TGCTGGCCGC CGTCGTGGCC CTGCCGGCGC TGCTGATGGT GCTCGGCGAG CGGGTCAACG CCTGGGGGAT CGGCGGTCTG CTCGGGCTCG TGCGGCGTCG CCGCGCCGGT CGTGCCCGGG GCGGCGAGGC GATCGGGCCC GCGGGCGCGG CGGGGTCGGC GCCGGTCGGG TCGGCGCCGG TCGGGTCGGC GCCGGTCGTG GTGCGGGAGG CGGCCGACTC GCCGTTCTGG CGTCAGGTCG CCGGCACCGT GATGCGCCAC CCCGTGCTCA CCGGCCTGCC GGTGATCGCG GTTCTGCTCG TCCTCGGGGC GCCCTTTCTG CACGTGAACT TCGGCACCCC GGACGACCGG GTGCTGAAGC CGGGCTCGGC GGACAGCCGG ATCGTCGGTG ACGCCCTGCG GGGCGCGTTC GCCGCCGACA TCGGCGGCGC GCTCGACGTC GTCGTCCAAG CCACCGGGCC GGGCATGATC GACCGGTCCG CGCTCGCCTC CTACGCGACC GCGCTGTCCG AACTGCCGGA CGTGGCCCGG GTCGACAGCG CCCTCGGGTC CCACATCGAC GGGCGCCGGG TCGTACCGCC CGGTCCGGCC AGCCGCCGGT TCGCGATCGC CGGAGCGGAT TCCCTCCAGG TCGTACCTGC GGTGGACTAT GCGTCGGACC ATGCGCAGGC CCTCGTCCGG GCCGCGCGTG CGGTGCCGGC GCCCGTGGGG ACCAGCGTGC TGATCGGTGG CGCATCCGCC GTCCTGGTAG ACGGCAAGAC CACGATCGCC GACCGTCTCC CGGTCGCCCT CGGGCTGATC GCGCTGGCGA CCTTCGTGCT GCTGTTCCTG TTCACCGGCA GCGTGCTGCT ACCGGTGAAG GCCATCGTGC TCAACGGGCT GGCGATGTGC GCCGTGTTCG GCGCCTCAGT GTGGATCTTC AGTGACGGCC ACCTGTCCGG GTTCCTCGAC TTCACCCCAG GCCCGCTGGA CACCTCCATG CCGGTCCTGC TCTTCTGTAT CGCCTTCGGG CTCTCGATGG ACTACGAGGT CTTCCTGCTC TCCCGGATCA AGGAGGCGCA CGACGCCGGC GCGCCCAACA CCGAGGCGGT CGCCACCGGG CTCGCCCGGG TCGGGCGGAT CGTCAGCACC GCCGCCGCGC TGCTCGCCGT CACCTTCGTC GCGTTCGGTA CCTCGTCGGT CCGGTTCATC CAGATGTTCG GGATCGCCAC CGCGCTCGCG ATCGTGCTCG ATGCCACCCT CATCCGCGGG GTGCTGGTCC CCGCCTTCAT GCGGGTGGCC GGCGACTACA ACTGGTGGGC CCCTGGCCCC TTGCGGACTT TGTATCGGCG GTTCGGACTA CGCGAATACT CCGTCCCGGA GCAGGGCGGG GTCAGAACCG TTCAAAGCCG CGCCGGCGCT CCCAGTCGGT GA
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Protein sequence | MFTPLVALVT RRPRLVLVLT LLVLLGAGGL AGGAFGKLQT GGFDDPASDS SRAEDVLDAR FHGRPNLLLL VTARAGDVDD AAVVAAGKEV AADLAAQAGA RDVVSYWTGG GPALRSRDGR QALVVASVQD DDQAADIVDH YGSWADAPGA VTVRPGGAAT VGEDISGHVS ADLAAAESFA IPITLALLVI AFAGVVAALL PLGIGLLGML GGFAALSVIG ELTDVSIFAV NLATALGLGL GIDYSLLMVS RFREELAAGR DRATAVEGTV RSAGRTILFS GATVIVALAV MLVFPPFFLK SMSYAGISVT LVAMLAAVVA LPALLMVLGE RVNAWGIGGL LGLVRRRRAG RARGGEAIGP AGAAGSAPVG SAPVGSAPVV VREAADSPFW RQVAGTVMRH PVLTGLPVIA VLLVLGAPFL HVNFGTPDDR VLKPGSADSR IVGDALRGAF AADIGGALDV VVQATGPGMI DRSALASYAT ALSELPDVAR VDSALGSHID GRRVVPPGPA SRRFAIAGAD SLQVVPAVDY ASDHAQALVR AARAVPAPVG TSVLIGGASA VLVDGKTTIA DRLPVALGLI ALATFVLLFL FTGSVLLPVK AIVLNGLAMC AVFGASVWIF SDGHLSGFLD FTPGPLDTSM PVLLFCIAFG LSMDYEVFLL SRIKEAHDAG APNTEAVATG LARVGRIVST AAALLAVTFV AFGTSSVRFI QMFGIATALA IVLDATLIRG VLVPAFMRVA GDYNWWAPGP LRTLYRRFGL REYSVPEQGG VRTVQSRAGA PSR
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