| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4025 |
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| Symbol | |
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| ID | 3906986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4811271 |
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| End bp | 4812173 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637881354 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_483104 |
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| Protein GI | 86742704 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.449136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACAACA TGGCGGTGTG CGCAATGAGG ACGGACGCGA TGAGTGACAC CCGATTACTT
CGTCCAGACG ACCGCGCGGC CTTGCGGGCC GAGCTGCGCA CCATCATCCG GCAGGGCGGA
GTCCCGGTGG CATTCGCCGG TGAGGTGGGT GGCAACCGCT TGCGCCTGAC GGAGTTCCTG
GGCACTCGCA CCACCGGCCT GCACAATCTG GAGGTCTGTC CCGGCACGGG ACTGGGCGGC
CGGGTGATCC TGCAGGGCCG CCCGGTCGGG GTGACCGACT ACGCCAGCGC GCGGAGCATC
ACGCATGACT ACGACCGGCC CGTCCTCCGC GAAGGTCTCG CCTCGTTACT CGCGGTTCCC
GTTCACGCTG GTGGCCGTTG CCGTGCCGTC CTCTACGGCG CGGTGCGCCA GCCCGCCGCG
TTGGGCGACC GGATACGGGA CGAGATCGTT GCCGCGGGCC GGCGGCTCGT CCACGAGCTC
ACCATCCGCG ACGAAGTCGA TCATCGGTTG GCGATGGCCG AGTCGCTCGC GGCCGTCAGA
CAGCTCGAGC CCGCGCACGC CGCCACGCTC GAGGAACTTC GTTCGGTGCA CTCCGAACTG
AGGGCCATCG CGGGAGCCAT GTCCGATTCG GCGCTCCAGC GCAGGATCTA CGCGGCCGCA
CAACGTCTCG TCGCCGTCGG CGAGAGCGGG CCGGGAAAGA ATTCCAAGGT ACGCCTGTCC
ACCCGTGAGA CCGATGTCCT CGCCCAGGTC GCGCTTGGCT GCACCAATGC CGAGGTCGCA
AACCGGCTTT CGCTCTCCCG CGAAACGGTC AAGGCATACC TGCAATCCGC CATGCGGAAA
CTGGACGCGG GCACACGCTA CGAAGCCGTC GTCCGCGCCC GCAAGGCGAT GCTGATCCCC
TGA
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| Protein sequence | MHNMAVCAMR TDAMSDTRLL RPDDRAALRA ELRTIIRQGG VPVAFAGEVG GNRLRLTEFL
GTRTTGLHNL EVCPGTGLGG RVILQGRPVG VTDYASARSI THDYDRPVLR EGLASLLAVP
VHAGGRCRAV LYGAVRQPAA LGDRIRDEIV AAGRRLVHEL TIRDEVDHRL AMAESLAAVR
QLEPAHAATL EELRSVHSEL RAIAGAMSDS ALQRRIYAAA QRLVAVGESG PGKNSKVRLS
TRETDVLAQV ALGCTNAEVA NRLSLSRETV KAYLQSAMRK LDAGTRYEAV VRARKAMLIP
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