Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3965 |
Symbol | |
ID | 3906925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4745151 |
End bp | 4745975 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637881293 |
Product | TatD-related deoxyribonuclease |
Protein accession | YP_483044 |
Protein GI | 86742644 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.659781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCGAA ACTCTGGCCG GTCGGGTGAT CCGCCGCCAC CGCCGGACCC TCTTCCCGTG GCCGTGGTCG ACAGCCACTG TCATCTCGAC CTGATGGGCA CCGAAGTTCC GGCGGCGATC GCGGCGGCCC GGGCGGTCGG TGTCACGCGG GCCGTCACCG TCGGCATCGA CCTGCCCACC AGCAGATGGC AGGCCGAGGT TGCCGCGGCG CATCCGGAGA TCTACGCCGC CGTCGCGATT CATCCCAACG AGGCGGCCCG GGGGGTCACC GAGGAGACGT TCGCCGCCAT CGCCGAGTTG GCCCGCGCCG ATCGCGTGCG CGCGGTCGGC GAGACGGGCC TGGACTACTT TCGCACCCCA CCCGAGGCGC ATGCCGTGCA GCAGGAGAGC TTCCGGCGCC ACATCGCGAT CGCCAAGGAG ACCGGCCGGG CGCTGATGAT CCACGACCGG GACGCCCACG ACGACACGCT GCGTATCCTC GCCGAGGAGG GCGCCCCGGA GAAGGTCGTC TTCCACGCCT TCTCCGGGGA CACGGCGATG GCGAAGATCT GCGCGGACGC CGGGTACGTG ATGTCGTTCG CCGGCAACGT CACCTTCTCC AATGCCGCCA ATCTGCGGGA GGCGGCGGCC GTCGCTCCGG CGGATCTCAT CCTGGTGGAG ACCGACGCGC CGTTCCTCAC CCCGACCCCC TGGCGGGGCC GGCCCGGCGG CCCGTACCTC ATTCCGCTGA CGCTGCGGGT GCTGGCCGAG ACCCGCGGCG TCGGCGTCGC CGAGCTCGGC ACGCACATCG CCGCGAACGC GGAGCGGGTG TTCGGGCCCT GGTAG
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Protein sequence | MARNSGRSGD PPPPPDPLPV AVVDSHCHLD LMGTEVPAAI AAARAVGVTR AVTVGIDLPT SRWQAEVAAA HPEIYAAVAI HPNEAARGVT EETFAAIAEL ARADRVRAVG ETGLDYFRTP PEAHAVQQES FRRHIAIAKE TGRALMIHDR DAHDDTLRIL AEEGAPEKVV FHAFSGDTAM AKICADAGYV MSFAGNVTFS NAANLREAAA VAPADLILVE TDAPFLTPTP WRGRPGGPYL IPLTLRVLAE TRGVGVAELG THIAANAERV FGPW
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