Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3948 |
Symbol | |
ID | 3906907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4726681 |
End bp | 4728096 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637881275 |
Product | glycosyl transferase family protein |
Protein accession | YP_483027 |
Protein GI | 86742627 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGGGTGG GGTCGAGGTG CGCGCAGGCC CGCCGGGGGT CCATCCGATT CCGCGGGACG ACTTTGGCGC GGTGCGGGTG TCACGGCTGC GCGGCGTCAT GGCGTCATGG CGTCAATGGC GCCGTACCGC AAAGGACGGA GCCGTTGGTT GTGGCTGACC GGCGGAACGC TACGGTAACC GCCATGACAG GTGTCCGGAC CATCGGTCGA GGTGCCGCCG TGGCGGCGCT GGGAGCCACA ACCGTTTACG GTCACGTCTT GTATCCGATC TATATCGGAT TGCGCAGCCG TGGTCTGGAG TCGACGGCAC CGCCGGACCC TGAGATCTGG CCGGGACTGA GCGTGGTCGT CTCCGCCTAT CGGGAGTCGG CGGTGATCGG GGCGAAACTG GATGAACTCA CCCGCGCGGA CTATCCCGGG CCGATGGAGA TCATCGTCGT GGCCGACGAT CCGGAGACGG CCGAGGCCTC GCGCCGGCCC GGCGTGCGGG TGCTGTCGTC CGGGGAACGC CTCGGCAAGG CGCGGGCGGT CAACCGGGGA GTCGCCGCCG CCACCCACGA GCTCGTGGTG CTCACCGATG CGAACGCTGT GCTCGCGCCC GGTGCCCTGC GGGCAGCCGC CCGTCATTTC ACCGACGAGA CGGTCGGCGC GGTGGCGGGG GAGAAGCAGG TTGACGATCC CGACGGCGCC CAGGGCTTCT ACTGGAAGTT CGAGTCCTGG CTGAAGCGCC GCGAGTCGGC GACCGGGGCG ACCATCGGCG TGGTCGGCGA GATGCTGGCC TTCCGCCGCC AGGCGTTTCG GCCCCTGCCC GCGGACGTGG CCGTCGACGA TGCCTGGCTG GCTCTCGACA TCCTCGAAGG GGGGCTGCGG GTCGTCTACG AACCCGAGGC GTACTCGATC GAGTCGTCGA GCCCGGACTA CTCGGCGGAG TGGGAGCGGC GGACCCGGAT CGTCGCTGGC AACCTCGACA TGCTCTGGCG GCGCCGGGCG GCGCTGGTGC CCGGCGCGCT GCCGGTCACC CCGCAACTGT GGGGCCACCG GCTGGTCCGC TCGTCATTCG GCCCGTTGGC GCAGGTCGTC CTGGTGGGGC TCGCCCTCCC GGCCGCCCGC CGGAGCTGGA TTGCCCGGCT GTTCCTGGCC GGCAACGCCG TCGGCGCTGT GAGTACCGCG GCGCTGCTGA CCGGGCGCAC GCCGCCCGGT CCGACCCGCC TGGTCGCGCA GGTCTTCTTC CTGCAGGCCG TCGCGCTCGG CGGGGTGCGG CGCTTTGTGG CCCGGGACCG GCCCGCCGTC TGGCCCAAGC CGGAGCGGCC GGCCGTGGCC TCCGCGACGT CACCGGCGCC CCCGGGGTCG GTCCTGCCAC CGGGGCAGAC GACGCCGCCT GGCCCGCCGA CCGAGTTGGC CCCGGCCGGC AACTGA
|
Protein sequence | MRVGSRCAQA RRGSIRFRGT TLARCGCHGC AASWRHGVNG AVPQRTEPLV VADRRNATVT AMTGVRTIGR GAAVAALGAT TVYGHVLYPI YIGLRSRGLE STAPPDPEIW PGLSVVVSAY RESAVIGAKL DELTRADYPG PMEIIVVADD PETAEASRRP GVRVLSSGER LGKARAVNRG VAAATHELVV LTDANAVLAP GALRAAARHF TDETVGAVAG EKQVDDPDGA QGFYWKFESW LKRRESATGA TIGVVGEMLA FRRQAFRPLP ADVAVDDAWL ALDILEGGLR VVYEPEAYSI ESSSPDYSAE WERRTRIVAG NLDMLWRRRA ALVPGALPVT PQLWGHRLVR SSFGPLAQVV LVGLALPAAR RSWIARLFLA GNAVGAVSTA ALLTGRTPPG PTRLVAQVFF LQAVALGGVR RFVARDRPAV WPKPERPAVA SATSPAPPGS VLPPGQTTPP GPPTELAPAG N
|
| |