| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3929 |
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| Symbol | |
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| ID | 3906888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4701620 |
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| End bp | 4703362 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637881256 |
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| Product | hypothetical protein |
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| Protein accession | YP_483008 |
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| Protein GI | 86742608 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4124] Beta-mannanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.284093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGTGC GCGGGCGCTC CTGGTCGGAT GACCCTCCGG CCGCTGGTCG CTGGCCGGTG
GCCGGATCGC CATCCTCGGA CCAGGACGGC ACGGTGCATC ACTCCGAGAC GGACCCGCCC
CGTTCGGCCG ATCGGCGGCC CGCCGGTGGG AGCGCCGGCA TGCCGACCCC GTCCCGGGGC
GAGTGGCCGG ACGCCCGGCT GCTCCCGCTG CGCCGTCGCC GAAGCGACAC GACGCCGCGG
ATCCTCCGTT CCCCTAGCGA GGGTTCCCCC ACCGAGCTGG TCCACATCCG CCGCGACGGC
GCTCCTCGCG ACGCGGATGG CGGCCCGGTC ACAGCCCCCG GCGGGGACCG GCCGGACCCG
GTGCGGGCAC GTCCGGACGG CGCCACCACG ACCGTGTTCC ATTGGCACGG GCGGCAGGCC
CCGGCCGGGA AGAGGCTGGA CACGCCGGAC ACGAACGTTC TGGCCCGGGA CGTTCTGGCC
CGGGACGTGC CGGTCTGGGA CGGGCCGGTG CCGGACGCGC GTGTTCGGGC GGACGGCGGC
GGTGAACCTG GCCCGGGTCG TCTGTCTCGC GTCGCCGGTT GGATCGCTGC GCGCCCGGGG
GGCCGAGCCG GCCGAATCCC GCGTCTCCCG CTTGTCGCGG TCTCGATCGC GGTCGTGACC
GCCCTGACCG CCTGGGTTCT GGTGTCCTCC GGAGGACACC CCACGGACAC GGTGGCCGGC
GGCCCGACGT CCGCCCCGCA GTCGCAGCCC CCGCCGCAGT CGCCACCCGC GCGGTCGCCG
AGCTCCGGCC CCTCGCCCGC ACCGGGGGTC CAGCCGCCGG TCACCGTGCC CCGGGTGCAG
CGGGCCGCCA CGACCGGTGA GTTTCCCACG GGGGTCGCCG CGCACACGTT GGCGCAGGCG
AACCGCTGGG CGGAATTCCG TGGCCGGCCC AACGACGTCG TCGTCATGTA CACCGAGCGG
TCCAGCTGGC GGGCGATCGT CGAGCCCTGG ATCGGTCGCG GCGCCTCGAC CTTCGCCGGG
TTCTCCGGCA CATGGGTCAT CAGCCAGCCG CTCTTTCCGG ACGAGGGGCC GGAGAAGGGC
AACCTCGCCG ACTGCGCGGC CGGCCGCTAC GACGCCGAGT GGCGGCAGTT CGGCCGCTGG
CTGGTGAGCA TGGAGCGGGG CGACTCGTTC GTCCGGCTGG GCTGGGAGTT CAACGGGCTG
TGGTTCGCGT GGGCGGCCAC GGACCCGCAG CAGTGGGTGC AGTGCTTCCG TAACGCCTCA
TCGGCGATCA AGGCTACCAG TCCGCGGGTC CGCATCGACT GGAACCTCAA CGCCCACGGC
TCGACCACGT CGGTCGGCGC CTTCGATCTC TACCCGGGTG ACCAGTACGT CGACGTCATC
GGGGTCGACA GCTACGACCA GTACCCGCCG AGCCCGACCT ACGCTGACTT CGACAACCAG
TGCAACGAGA CCGGCGGTCT CTGTCAGGTG ATCATCTTTG CGCGGATCCA TCACAAGCTG
TTCTCGGTGC CGGAGTGGGG CGTGGTCAGC CAGCAGGGCA CCAAGGCGGG TCGGGTCGGG
GCCGCGGGTG GGGACAACCC CGTCTATATA GAGAAGATGC ACGAGACGTT TGTGCGTAAC
GCGGACATTC TCGCCTACGA GGCGTACTTC CCCGATGCCG TGCCGAACAA CGTCCGTTCC
TCGTTGGTCG ACCCCACCAT CAATCCCGCG GCGGCGGCGA TGTACCAGCG GCTCTGGGGC
TGA
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| Protein sequence | MRVRGRSWSD DPPAAGRWPV AGSPSSDQDG TVHHSETDPP RSADRRPAGG SAGMPTPSRG
EWPDARLLPL RRRRSDTTPR ILRSPSEGSP TELVHIRRDG APRDADGGPV TAPGGDRPDP
VRARPDGATT TVFHWHGRQA PAGKRLDTPD TNVLARDVLA RDVPVWDGPV PDARVRADGG
GEPGPGRLSR VAGWIAARPG GRAGRIPRLP LVAVSIAVVT ALTAWVLVSS GGHPTDTVAG
GPTSAPQSQP PPQSPPARSP SSGPSPAPGV QPPVTVPRVQ RAATTGEFPT GVAAHTLAQA
NRWAEFRGRP NDVVVMYTER SSWRAIVEPW IGRGASTFAG FSGTWVISQP LFPDEGPEKG
NLADCAAGRY DAEWRQFGRW LVSMERGDSF VRLGWEFNGL WFAWAATDPQ QWVQCFRNAS
SAIKATSPRV RIDWNLNAHG STTSVGAFDL YPGDQYVDVI GVDSYDQYPP SPTYADFDNQ
CNETGGLCQV IIFARIHHKL FSVPEWGVVS QQGTKAGRVG AAGGDNPVYI EKMHETFVRN
ADILAYEAYF PDAVPNNVRS SLVDPTINPA AAAMYQRLWG
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