Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3860 |
Symbol | |
ID | 3906628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4623268 |
End bp | 4624254 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 637881186 |
Product | hypothetical protein |
Protein accession | YP_482939 |
Protein GI | 86742539 |
COG category | [S] Function unknown |
COG ID | [COG2912] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.493821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.355777 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACCC GCAGCCGCGG CAGGTTCGCC GAGGTCGTGC GCCGCGAGCC GATCGACCTG GCGGTCGCCT GCCATCTGCT CGCCGCCGAG GTCGACCCGG CAGCCGACGC CCCCGATGCC ACCGCCACCC TGAGCGCCCT CGACGCATTC GCCGCGCAGG CCCGTCCACT GCTCGCCGCG CGGACGACCT CGAGCCGACG GCCCCGGTTC CCCCGGGCCG AGCACGGTAC GCCGGTGGCA CGCCAGACCG GCGCACCGGG ACAGGCACAG CCGGGACAGG CACAGCCGGA ATCCGGATCC GAGGCGGCAG GGCGCCTGGA GGGGTTCGGC CCGGGAGCGG GGAATTTCGA TCCGAGGATC GCCGCCGAGA CGCTGCACGA GTCCCTGGGG CTCGCCGCCG GCTTCGCCGG GGCCGAGGAC GACTACACCG ACCTGCGCTC CTCGCTGCTC CCCGATGTGC TGCGCCGGCG GCGCGGCCTG CCGATCCTGC TCTCCGTCGT CTGGCTGGAG GTGGCCGCCC GGCTCGGGGT CCCCGCCTAT CCTGTCGGGC TTCCGGGGCA CGTCGTGGTC GCGGTGGGTT CCCCCCAGGA CCACGTGCTC GTCGATCCGT TCGCCGCCGG TCGACTACTG ACGGTGCACG ACGCCGCGGA GAAGGTACGC GCGGCCGGGT TCGCCTTCAC CCGTGCCCAC CTCGCCCCGA TGAGCGCGCA GGACGTGCTC ACCCGGATCC TCGGCAACAT CCGGATCCTC GGGGCCCGCT CGGACGCGCC GCACATGCGG CTGTGGGCCG TCGAGCTGTC CCTGCTGCTC CCCCACCACC CGGCGAGCCT GCGCCGGGAG CGCGGCGAGC TCCGCGTCCG GTTGGGCGAC TTTCTCGGCG GGGCCACCGA TCTGACCGCG TTCGCCGACA CGGTGGCCGC GGTCGAGCCA GCCGCCGCGG CGGCCGCCCG CCAGGCCGCC GCCGCGGCCC GCGCCCGGCT CAACTAG
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Protein sequence | MSTRSRGRFA EVVRREPIDL AVACHLLAAE VDPAADAPDA TATLSALDAF AAQARPLLAA RTTSSRRPRF PRAEHGTPVA RQTGAPGQAQ PGQAQPESGS EAAGRLEGFG PGAGNFDPRI AAETLHESLG LAAGFAGAED DYTDLRSSLL PDVLRRRRGL PILLSVVWLE VAARLGVPAY PVGLPGHVVV AVGSPQDHVL VDPFAAGRLL TVHDAAEKVR AAGFAFTRAH LAPMSAQDVL TRILGNIRIL GARSDAPHMR LWAVELSLLL PHHPASLRRE RGELRVRLGD FLGGATDLTA FADTVAAVEP AAAAAARQAA AAARARLN
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