Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3792 |
Symbol | |
ID | 3906077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4543618 |
End bp | 4545828 |
Gene Length | 2211 bp |
Protein Length | 736 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637881118 |
Product | UvrD/REP helicase |
Protein accession | YP_482871 |
Protein GI | 86742471 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.976756 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.84533 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTCCG GACCGCCTGC CCTCGCCGCC CAGGCCGCCC GTGTGCGATC GGGCAACGAT CTGCTCGCCG CGCTCGATCC CGAACAGCGG GCCGCGGCCG GAGCCCCGCT CGGACCGGTC TGCATCCTCG CCGGCGCCGG TACAGGTAAG ACACGCACCA TCACCCATCG AGTCGCGCAC ATGGTCGCGC AGGGGGGGGT CGGGCCGGGC CAGATCCTGG CGGTGACCTT CACGGCCAGG GCTGCGGGAG AGCTGCGCGG CCGGTTGCGG GCCATGGGTG TCGATGGAGT GCAGGCCAGG ACGTTCCATT CCGCGGCTCT CAAGCAACTG TTGTACTTCT GGCCGTCGGT CGCCGGGGTC GCGCTGCCCA AGGTGGAGAA GAGCAAGATC CCGTACGTGG TGCGGGCGGC CGCCCGCCTG CACCTGCGGC CGGACCGGGC CGAGCTGCGC GACCTCACCT CGGAGGTCGA GTGGGCGAAG ACGACGCTTG TGACCCCGGC GGACTACGCC CGGATGGCGG CGGCGAGCGG GCGGGAGACC GCCGCTCCCC CCGAGACGGT CGCCCGGCTC TACGCCGCGT ACGAGGAGGT CAAGCGCGAC GCCGGTGTGA TCGACATGGA GGATCTGCTG CTGCTGACCG CGGCGATGAT CGAGGAGCAC AGCTGGGTCG CGGCCGAGGT GAGGGCCAGA TACCGCCATT TCGTCGTTGA CGAGTATCAG GATGTCAACG ACCTGCAACA GCGTGTCCTC GACGCCTGGC TGGGGGAGCG CGACAGCCTC TGTGTCGTCG GGGACCCCCA TCAGACGATC TATTCGTTCA CCGGGGCGTC GCCCGAGCAC CTGCTCGGAT TCCCGCGCCG GTTCCCGGAC GCGGCCGTGG TGCGTCTGAT CCGAGACTAC CGGTCCACCC CCCAGGTGGT CGGACTCGCG AACACCCTGA TGCGGGCGGC CCCGGCGGCC CGCCTCGTCG CCGCTCGCCC GGACGGTCCC GCCCCGGTGT GGCTGGAGTG CGACAGCGAG CCGGCGGAAG CCGCCGCGGT GGCGTCCCGG ATCCGCCGGC TGCTCGACCA GGGCGTGCCG GCGAGTGAGA TCGCCGTGCT GTACCGCACG AATGCCCAGT CCGAGGCGTA TGAGGCGGCG ATCGGCGGGG CCGGTATCGC CTACCTGCTC CGGGGCGGGG AGAAGTTCTT CGAGCGGACC GAGGTCGTCG CGGCCATGAG GTTGCTGCGG GCCGCGGTGC GCTCCGCCGA CACCGACCGC CCGGAGGGAC TCACGGCCGC TGTCGCCGAC ATCCTCGCGG CGCTCGGCTG GCGGGCGGAC CAGCCGACGG TGGGCTCGGG CGCCGAGCGG GAACAGTGGG AGAACCTCGC CGCGCTGCAC CGGCTGGCCG GCGATCTCGC CGCCCGTTCG CCCGAGGCCG ACCTCGAGGC CTTCGTCGCC GAGCTCGGCG ACCGCGCGAC CCACGAGCAT CAGCCGACGG TGCAGGGGGT GACCCTGTCG ACCCTGCACA CCGCCAAGGG CCTGGAATGG GATGCGGTGT TCCTCGTCGG GCTGACCGAG GGCACGCTTC CCCTCGTCCA TGCCAGGACC GCCGAGCAGA TCGCCGAGGA ACGTCGCCTG CTCTACGTCG GGGTGACCAG GGCCCGTAGG CACCTCGTCC TGTCCTGGGC GCTGTCCCGG GCGGAGGGCG GCCGGCGGTC GAGGCGGCCG TCTCGCTTCC TCGACGATCT GCGTCCGATG CGCCGGGAGT CCGCGGCCGG CGTCCGCCAC GGGGGGCGAG GCGAGGGCAC GAGGCCCGTG GCCGGGGCGG AGGAGACCGG CCCGGGTCGG TCCCGGAGCA GGTCGGCGGT GCGGTGCCGG ACGTGCGGCC GGTCGTTGAC GGGTGTGCAC GCGCGGGTCG GGCGCTGCGA GGGCTGCCCC GGCGACGTCG ACGCCGCGCT GTTCGAGCGC CTGCGGGTGT GGCGTTCGGC GCGGGCGAAG GAACAGGGGG CACCGGCCTT CGTCGTCTTC ACCGACGCCA CGCTGCAGGC GATCGCCGAG AGCCGGCCGG GCACGGTGGC CGAGCTCGTG CGGCTGCCCG GCATCGGACA GGCCAAACTC GACCGTTACG GGGAGGAGGT ACTCGCCCTC GTCGCGGGGC GCACGCCGCC GGTCGGGTCG CCGCCGGTGG TGGAGTCACT GGGGTCCGAC ACGCCGCCCG ACGCTTCGTA A
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Protein sequence | MMSGPPALAA QAARVRSGND LLAALDPEQR AAAGAPLGPV CILAGAGTGK TRTITHRVAH MVAQGGVGPG QILAVTFTAR AAGELRGRLR AMGVDGVQAR TFHSAALKQL LYFWPSVAGV ALPKVEKSKI PYVVRAAARL HLRPDRAELR DLTSEVEWAK TTLVTPADYA RMAAASGRET AAPPETVARL YAAYEEVKRD AGVIDMEDLL LLTAAMIEEH SWVAAEVRAR YRHFVVDEYQ DVNDLQQRVL DAWLGERDSL CVVGDPHQTI YSFTGASPEH LLGFPRRFPD AAVVRLIRDY RSTPQVVGLA NTLMRAAPAA RLVAARPDGP APVWLECDSE PAEAAAVASR IRRLLDQGVP ASEIAVLYRT NAQSEAYEAA IGGAGIAYLL RGGEKFFERT EVVAAMRLLR AAVRSADTDR PEGLTAAVAD ILAALGWRAD QPTVGSGAER EQWENLAALH RLAGDLAARS PEADLEAFVA ELGDRATHEH QPTVQGVTLS TLHTAKGLEW DAVFLVGLTE GTLPLVHART AEQIAEERRL LYVGVTRARR HLVLSWALSR AEGGRRSRRP SRFLDDLRPM RRESAAGVRH GGRGEGTRPV AGAEETGPGR SRSRSAVRCR TCGRSLTGVH ARVGRCEGCP GDVDAALFER LRVWRSARAK EQGAPAFVVF TDATLQAIAE SRPGTVAELV RLPGIGQAKL DRYGEEVLAL VAGRTPPVGS PPVVESLGSD TPPDAS
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