Gene Francci3_3674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3674 
Symbol 
ID3905358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4405907 
End bp4407286 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content73% 
IMG OID637881000 
Producthypothetical protein 
Protein accessionYP_482755 
Protein GI86742355 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.476459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCAGC CACGTCGCGA GCCCTCGCCC GAGCAGGCGC GCGCCGACCG TGCGAGCTGC 
GACCAGCGGG CCCACCCCGG GCACCGATCT CATCCTGATC GTGACCCGGC TTCCGGGCGA
GGCCGGGAGC GGCCCGGACG ATACTCCGCC GATGATCGCG GCGGGCCGGT GACCGGCGCC
GATCCGGGCC AGGCCGACCC GGCGTACGCC GGTCCTTCGC GGGCGGCCGG CTGGGAACAG
GGCCGGAGAG GGCAGGTTCC GGTGGACGCC CATCCGCCGA GAGAGGACCG GTTCCCGGGA
CGGAACGCCC CGGCATGGTC CCCCTCGCAG CCAAGCCACG GCGGGTCGAG TGGCTACGGG
GACCATGCCG GATCGGGGTA TGGGGCGCGG GAGGAGCACC GCTCCGTCGC GGGCTCTCGG
GGCGCGCCCG CGTACGAGGC GACCGATCCG CGCGAGGCCG ATGACCTGCC GGAGGCTGAG
TGGCGCGAGA CCGGTCCCGA GGCCGGGGAC CGCGGGGCGG GTGGCCCTGA GGACATCCGG
CCTGATGAGG TCCGGCCTGA TGAGGTCCGG CCTGATGAGG TCCGGCCTGA TGAGGTCCGG
CCTGATGAGG TCTGGCCTGA TGAGGTCCGG CCCGACGAGG TCCGGCCCGA CGAGGTCCGG
CCCGACGAGG TCCGGCCCGA CGAGGTCCGG CCCGACGAGC CGGAGTCGGC CGTGGCATCC
GAGCGCGCCG AGCACGCCGG ACCGGCGACG CCGACACGGT CTCCGACGGG CCCGGATCAA
CGGGATGCGG AGCGCGGCCC GGTCGACCAT GGCGGCACCG CGGCTCAGGA TGATCAGGTT
CCTCAGGACG GTTCGGCGGA TCAGGACTGC CCCGTGGACC GTCCGGGCCC TGACGGCGGC
GGGACGGATC TGGTGGGTTC GATCGGTGCT GTCCAGGCGG TGGCGCTGGA ACGCCTCGCG
AGCCGCGTTG ACGAGCTGGC CCGGCTACGG CGTCACGATA CCCAACTCGT GGACCGATTG
CATGCCGAGA ATGCCCGGCT ACGTAGTGGT GAGCTTACCG AAGCCATGGC CCCCCTTCTG
CGGGGGTTGA TTCGACTTCA TGATCAAATG GGTAGCCTGG GGGCCGACGA TCCGCAGAGT
GTCGCCGGCA TCCTGCGTAA GCAGCTGCTC CAGGTGCTCG ATGTCGCTGT GGACGTCCGC
CCGTACACGG CGGTGCCGGG CGGGACCTTC GACCCGGCGC GGCACCTGGG GGTGCGTCGG
GTGCCGACGG ACGACCCGGG ACGGGACGGG ACGATCGCTC GTACCGTTCG TCCGGGTTTC
GTCCGCGGCG AGACCACGGT CGTCCGACCG GCGGAGACCG AGGTCTACCG ATCGCGCTGA
 
Protein sequence
MFQPRREPSP EQARADRASC DQRAHPGHRS HPDRDPASGR GRERPGRYSA DDRGGPVTGA 
DPGQADPAYA GPSRAAGWEQ GRRGQVPVDA HPPREDRFPG RNAPAWSPSQ PSHGGSSGYG
DHAGSGYGAR EEHRSVAGSR GAPAYEATDP READDLPEAE WRETGPEAGD RGAGGPEDIR
PDEVRPDEVR PDEVRPDEVR PDEVWPDEVR PDEVRPDEVR PDEVRPDEVR PDEPESAVAS
ERAEHAGPAT PTRSPTGPDQ RDAERGPVDH GGTAAQDDQV PQDGSADQDC PVDRPGPDGG
GTDLVGSIGA VQAVALERLA SRVDELARLR RHDTQLVDRL HAENARLRSG ELTEAMAPLL
RGLIRLHDQM GSLGADDPQS VAGILRKQLL QVLDVAVDVR PYTAVPGGTF DPARHLGVRR
VPTDDPGRDG TIARTVRPGF VRGETTVVRP AETEVYRSR