| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3574 |
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| Symbol | |
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| ID | 3904513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4272113 |
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| End bp | 4273297 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637880895 |
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| Product | peptidase M50 |
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| Protein accession | YP_482655 |
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| Protein GI | 86742255 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCTTC TCGGCATTGC GGCGTTCGCA CTGGCCCTGC TGGTGTCGGT CGTCGCGCAC
GAGGCCGGGC ATTTCGTGAC GGCCCGGCAC TACGGCATGA AGGCCTCCAA GTTCTTCGTC
GGTTTCGGGC CGACCATCTG GTCCCGGCGG CGGGGGGAGA CCGAGTACGG TGTCAAGGCC
ATTCCGGCCG GCGGTTTCGT CAAGATCGAG GGGATGACTC CGCTCGAGGA GATCGATCCG
GCCGATGAAC CCCGCGCCTT CCACAATGCG CGGGCGCGGG CCCGGCTCGT GGTCATGTCG
GCCGGTTCCT TCGTGCATTT CGTCATCGCC ATCGTGCTGG TCTACGGAGT GCTCGTTGTC
CTGGGCACGA CCACGATCAG CGAGTCGAGG GTCGGCGCGA CGAGTTGCAT CGCCACGACC
GCGACTTGTT CCGGACCGGG GCCGGCCGCG GCGGCCGGTC TGCGGCCGGG TGACCGGATC
GTCAGCTTCG GCGGAGTTCC GGTCACGACC TGGACGCAGT TCACCCGGCA GGTGCGTGCG
CACGGAGCGG GGCCTGCGGT GATGGTCGTC GAACGGGACG GCCGCACCCT CACTCTCACG
CCGAACCTGG TGGAGGTCCG GCGCGATCGG GAGACCGGGC AGGCGGGCGA CGACCGGGTC
GGCGCCTTGG GCGTCAAACC GGGAACCGAG ACAGTGCACT ACAACCCGAT CGAAGCGGTG
CCCCGCACCT TCGATGTCAT CGGGTCCGGG TTCACCGGCA TGTACGAAAC GCTGACCCGC
CGGATCGGTG ATATCGGTAA TATCTTCAGC GACAACCGCG ACCCCCAGGG TTTCATCAGC
GTGGTGGGAG CGGCGCGTAT CGGCGGTGAC GTGGTCTCGG CCGAGGGCAG TTCGGCCGTG
GACCGGGTGC GGAACCTTCT CATTCTGGTC GCCGCGATCA ATCTCGCGGT CGGAATTTTT
AACCTGTTGC CCCTACTCCC GTTGGACGGC GGTCATATTG CCGTGCTGGG CTTCGAGCAG
GCCCGGCACG GTCTACGCAG GCTCCGGGGT TATCGCGGTC CGGTGCAGAA GGTGGATTTC
GCCAAACTGT TACCAGCCAC GTACGCCACG GTCGTCGTAT TGCTCGGGTT CAGTCTGCTT
GTCCTGTCCG CCGACATCGT CAATCCCATT CGCCTGAATC AGTAA
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| Protein sequence | MELLGIAAFA LALLVSVVAH EAGHFVTARH YGMKASKFFV GFGPTIWSRR RGETEYGVKA
IPAGGFVKIE GMTPLEEIDP ADEPRAFHNA RARARLVVMS AGSFVHFVIA IVLVYGVLVV
LGTTTISESR VGATSCIATT ATCSGPGPAA AAGLRPGDRI VSFGGVPVTT WTQFTRQVRA
HGAGPAVMVV ERDGRTLTLT PNLVEVRRDR ETGQAGDDRV GALGVKPGTE TVHYNPIEAV
PRTFDVIGSG FTGMYETLTR RIGDIGNIFS DNRDPQGFIS VVGAARIGGD VVSAEGSSAV
DRVRNLLILV AAINLAVGIF NLLPLLPLDG GHIAVLGFEQ ARHGLRRLRG YRGPVQKVDF
AKLLPATYAT VVVLLGFSLL VLSADIVNPI RLNQ
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