Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3547 |
Symbol | thyX |
ID | 3904486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4241052 |
End bp | 4241849 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637880868 |
Product | FAD-dependent thymidylate synthase |
Protein accession | YP_482628 |
Protein GI | 86742228 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1351] Predicted alternative thymidylate synthase |
TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.583534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.337603 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGAGG TGGCAGTGTC GCAGCCGACG TCCGAACCGA CGTCCGAACC GACGTCCGTG CGGCTTCGGG TCCAGGTGAT CGCCAAGACC GAGTTCATCC CCCCGGACGA CGTGGCCTGG AGCACCGACG CCGACGGCGG TCAGGCCCTC GCCGAGTTCG CCGGGCGGGC CTGCTACCAG AGCTGGAACA AGCCGAATCC GGCGACCGCG ACCAACGCCG GCTACCTACG GCACATTCTC GACGTCGGGC ATCTGTCCGT GCTCGAGCAC GGGACCGTAT CGCTCTATCT CACCGGGGTG TCGCGCAGCC TCACCCATGA GCTGGTCCGG CACCGGCACT TCTCCTACAG CCAGCTCTCC CAGCGCTACG TCCCCGAGCG GGACGCCGCC GTGGTGGAAC CGGAGGTCAT CGCGGCCGAT CCGGAGCTGC ACGCCCTGTT CCAACAGGCC GCGGCGGCCT CGCTGGAGGC CTACGGGCGC CTGTTGGAAG GTCTGGAGAA GCGGTTCGCC GACGTTTCCG CGCCCATCTC ACGGCGCAAG CAGGCGCGCC AGGCGGCCCG GTCGGTGCTG ATGAACGCGA CCGAGACCCG GATCGTGGTC ACCGGGAACT ACCGGGCGTG GCGGCACTTC ATCGGGATGC GGGCGAGTGA GCATGCCGAC GTGGAGATCC GCGGGCTTGC CGTCGCCGTC CTGCGGGAAC TGCTCCGGGT GGCGCCCAAC GTGTTCGCCG ACTTCCGGAT CTCGACGCTG GATGACGGCA CCGAGGTCGC CTCCAGCCCG CTGGTGGGGG AGGGCTGA
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Protein sequence | MMEVAVSQPT SEPTSEPTSV RLRVQVIAKT EFIPPDDVAW STDADGGQAL AEFAGRACYQ SWNKPNPATA TNAGYLRHIL DVGHLSVLEH GTVSLYLTGV SRSLTHELVR HRHFSYSQLS QRYVPERDAA VVEPEVIAAD PELHALFQQA AAASLEAYGR LLEGLEKRFA DVSAPISRRK QARQAARSVL MNATETRIVV TGNYRAWRHF IGMRASEHAD VEIRGLAVAV LRELLRVAPN VFADFRISTL DDGTEVASSP LVGEG
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