Gene Francci3_3545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3545 
Symbol 
ID3904484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4237289 
End bp4238590 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content75% 
IMG OID637880866 
Productacetate kinase 
Protein accessionYP_482626 
Protein GI86742226 
COG category[C] Energy production and conversion 
COG ID[COG0282] Acetate kinase 
TIGRFAM ID[TIGR00016] acetate kinase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0443913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.518352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCCTAC TGAGCCTCGC CCCTACCGAG CCCCGCCCCG TCGCGATGAA CGTCCTGGTG 
GTCAACGCCG GATCGGCCAG CCTCAAGCTG CGGCTGATCG GCCCGGACGA CGTCCTGCTC
GCCGCGCGCG ATCTCACCGC GCCAGCCGGT CGGGTGGACC CGGCCGGGGT CATCGCCGCG
TTGCGCGAGC TCACCCACGA GGGTGGCCAG CCGGGCGCGG TCGGGCACCG CATCGTGCAC
GGCGGGACGG ATTTCACCGC ACCCGTGGTC GTCGACCGGG CCGTGGCCGA GCGGCTGCGG
AGGCTGACCG CCCTCGCCCC CCTGCACCAG CCTGCGGCAC TTGCCGCCCT CGACGAGGTC
GGGGCGGCCG TGCCCGAGGT GGCGCAGGTC GCTTGCTTCG ACACGGCGTT CCACAGCCGG
ATGCCGGCGG AGGCCATCAC CTACGCCATC CCGGCCGAGT GGCGGGAGCG GTATGGCATC
CGCCGGTACG GCTTCCACGG CCTGTCCCAC GCCCACGTCT CCCGGCGGGC GGCCGCGCTC
ACCGGGGCGC GGCGCATCGT GACCTGTCAT CTCGGCTCGG GCGCGTCGCT CGCCGCCGTT
CTCGACGGGG TGGGGGTGGA CACCACGATG GGCTTCACCC CGCTGGAGGG CCTGGTGATG
GCCACCCGGT CCGGCACCGT GGATCCCGGC GCGCTGCTGT GGCTGCAGAC GGAGGCGGGA
CTGAGCGCGC ACGAGCTCAC CGATCGCCTG TTCACCTCGG CGGGGCTGCG CGCGCTCGCG
GGGACGGCGG ACATGCGGGA TGTCGAGTCC GGCGTCGCCG CGGGTGAGCC TGCCGCCGCG
CTGGCGCTGG CGGTCTACCT GCACCGGCTG CGCGCCGGGA TCGCCGCGAT GACCGCCGCG
CTGGGCGGGC TGGACGCCCT GGTGTTCACC GGCGGCGTCG GGGAGAACTC CGCCTCCGTG
CGGGCCGGGG CCGCGGCCGG ACTCGGCTAC CTGGGCGTGG CGGTGGATCC CGAGCGTAAC
GATCCGGCCC GGGCCGGTGG TACGGGTCTG CCGGGCGGCA CGGGCCCATC TGGTGGTACG
GGCCCATCTG GTGGTACGGG CCCATCTGGT GGTACGGGCC CATCTGGTGG TACGGGCCCA
TCTGGTGGTA CGGGCCCATC TGGTGGTACG GGCCCATCTG GTGGCACGGA GCGCGAGATC
GGCGTGCCGG GGGCCGCCGT GCGCACGCTC GTGATCGAGG CACGCGAGGA CCTGGAGATC
GCCCGCGGGA CCCGGGCGGC CCTCGCTGGT GGCAATGGGT GA
 
Protein sequence
MALLSLAPTE PRPVAMNVLV VNAGSASLKL RLIGPDDVLL AARDLTAPAG RVDPAGVIAA 
LRELTHEGGQ PGAVGHRIVH GGTDFTAPVV VDRAVAERLR RLTALAPLHQ PAALAALDEV
GAAVPEVAQV ACFDTAFHSR MPAEAITYAI PAEWRERYGI RRYGFHGLSH AHVSRRAAAL
TGARRIVTCH LGSGASLAAV LDGVGVDTTM GFTPLEGLVM ATRSGTVDPG ALLWLQTEAG
LSAHELTDRL FTSAGLRALA GTADMRDVES GVAAGEPAAA LALAVYLHRL RAGIAAMTAA
LGGLDALVFT GGVGENSASV RAGAAAGLGY LGVAVDPERN DPARAGGTGL PGGTGPSGGT
GPSGGTGPSG GTGPSGGTGP SGGTGPSGGT GPSGGTEREI GVPGAAVRTL VIEAREDLEI
ARGTRAALAG GNG