Gene Francci3_3517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3517 
Symbol 
ID3905251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4200930 
End bp4201730 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content76% 
IMG OID637880839 
Producthypothetical protein 
Protein accessionYP_482599 
Protein GI86742199 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.40608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0746864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCG TCGCCGCCGC GGTCTGTCCT CATCCTCCGT TGCTGGTTCC CGAGGTCGGC 
CGTGGTGAGC CGGTCGAGGC GCGGGCCGTC GCGGTGGACG CGGTGCGCCT GCTGTGTGCC
GCCGAGCCGG ACACGATCGT GGTGGTGGGT GACGCGGCGA CCGAGGTGTC CTACGGCCCC
GCCGCGTCCG GGTCGCTGGC CGGCTTCGGG GTGGATCTCC GGGTGGATCT TGGCCCGACC
GCGCCGGCCC CCGAGCCGTC GTCCGTCCTG TCGTCGCCCG CTCTACCGTT GTCGATCACG
ATCGGCGCCT GGCTGCTGGG CGTCGTCGGT TGGCCCGGCG CCCGCACCGC CGTCGGGGTG
CCCGCGGAGA TCTCCCCGGA CGGGGCCGTC GCACTCGGAT CGCGGCTGGT CGCGGGCTCC
GCTCCGCAGG AGCGCCTCGC CCTGCTCGTG ATGGGCGACG GCTCGGCCTG TCGCACGCTG
AAGGCTCCCG GCGGGTTGGA CCCACGGGCC GCGGCGTTCG ACGCGACCGC CGCCGCGGCG
CTGGCCGCAG GGGATCCGGC CGGCCTGCTC GCCTTGGACC CGGGGTTGGC CCGGGAGCTG
CTCGCCGCGG GCCGGGCGTC CTGGCAGGTC CTGGCCGGCG CCCTGCTCGC CGCGACCCGG
GACGGCCCGG GCCCGGCGTC CCCGGGCCCG GGGTCCCTGG GCCCGGGGTC ATGGAACAGT
GACCTCCGGT ATGACGACGC GCCGTATGGT GTCGGCTATC TGGTTGCCCT CTGGACACGG
GATGTTGCCG AGCGAGGATG A
 
Protein sequence
MTLVAAAVCP HPPLLVPEVG RGEPVEARAV AVDAVRLLCA AEPDTIVVVG DAATEVSYGP 
AASGSLAGFG VDLRVDLGPT APAPEPSSVL SSPALPLSIT IGAWLLGVVG WPGARTAVGV
PAEISPDGAV ALGSRLVAGS APQERLALLV MGDGSACRTL KAPGGLDPRA AAFDATAAAA
LAAGDPAGLL ALDPGLAREL LAAGRASWQV LAGALLAATR DGPGPASPGP GSLGPGSWNS
DLRYDDAPYG VGYLVALWTR DVAERG