Gene Francci3_3424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3424 
Symbol 
ID3905664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4071720 
End bp4072847 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content74% 
IMG OID637880747 
Productaminoglycoside phosphotransferase 
Protein accessionYP_482507 
Protein GI86742107 
COG category[R] General function prediction only 
COG ID[COG2334] Putative homoserine kinase type II (protein kinase fold) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACGA CCTCCGTCGA CGGGCTGGTG GGGCTGGATG GCGTCCTCGG TGACGTCCTC 
GCCGCCTATG ATCTCGGCCC GTCGCCGCGG GCGAGCCTGC TGCATGTCTC GGAGAACGTC
ACTTACCGCG TGGACGACCC GGCGACCGGC CGGCGTTGGG CGTTGCGGCT GCACCGGCCC
GGGTACCACA CTCTCGTCGA GATTCACGGG GAGCTGGCGT GGGTGGCTGC CCTGCGCGCC
GACGGCGTGG TCGTGACGCC GCCGGTCGTG CCGACGAGGG CGGGTGGGCC CGTGGCGACC
GTGGCCGCGA CCGGAACCCT CCCGCCGAGT GCCGCCTCGC CGGATCCCGC TGGGCTGGAT
CCCGCTGGGC CGGATGGTGC CGAGCGGCAC GCCGTGTTGT TCGAATGGGT CGACGGACGT
TCACCGGAAC CGACGGACCC CATGTCCCTG CGCGGCGCGT TCGGGCAGCT CGGGGACATC
ACCGCGCGGC TGCACCGGCA CGCGCGGGAG TGGTCCCGCC CGACTACCTT CGCCCGCTTC
GAGTGGACCT GGCGGAGCAT GCTCGGCGAC GCCGGCCGGT GGGGGAGCTG GTCGGAGGGC
TTGGTCACCG CGCTGGCCGA CGGCCCCGGC CCGCCGGGGG ACGGCCCGCG GGGGGACGGC
CGCGCGGCGT TGGGCCTGCT GAGCCGGGCC GCGGCCGACA TCGAGGCACG CCTGGCCGCC
TTCGGCACCG GGCCGGACCG GTTCGGGCTC GTCCACGCCG ACATGCGGCT GGCGAACCTC
CTGGTACCCC GGGATGCGTC CACCGGGGAC GTCTGCGTGA TCGATTTCGA CGACTGCGGC
TTCGGCTGGT ACCTCTGGGA TCTCGCCGCG TCGCTGTCCT TCATCGAGCA CCTCGACGAG
GCCGGCGACC TGGTGGCCGC CTGGCTGGCC GCCTACCAGC GCCAGCGCCC GCTCACCGCG
GACGACGTAG CGATGATCCC TACCTTCGTC CTGTTGCGCC GGCTGCTCCT GGTGGCCTGG
CTGGGCACCC ATCCGCACTC GGACGCGGTG CCGAGCGCCT CCGAGTACGC CCGGGACAGT
TGCGAGCTGG CCGAGGCCTA TCTGGGCGGG CGGTTCCTCA CCGGCTGA
 
Protein sequence
MSTTSVDGLV GLDGVLGDVL AAYDLGPSPR ASLLHVSENV TYRVDDPATG RRWALRLHRP 
GYHTLVEIHG ELAWVAALRA DGVVVTPPVV PTRAGGPVAT VAATGTLPPS AASPDPAGLD
PAGPDGAERH AVLFEWVDGR SPEPTDPMSL RGAFGQLGDI TARLHRHARE WSRPTTFARF
EWTWRSMLGD AGRWGSWSEG LVTALADGPG PPGDGPRGDG RAALGLLSRA AADIEARLAA
FGTGPDRFGL VHADMRLANL LVPRDASTGD VCVIDFDDCG FGWYLWDLAA SLSFIEHLDE
AGDLVAAWLA AYQRQRPLTA DDVAMIPTFV LLRRLLLVAW LGTHPHSDAV PSASEYARDS
CELAEAYLGG RFLTG