| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3395 |
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| Symbol | |
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| ID | 3905977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4025043 |
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| End bp | 4027232 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637880717 |
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| Product | WD-40 repeat-containing serine/threonin protein kinase |
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| Protein accession | YP_482478 |
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| Protein GI | 86742078 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0235207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.820289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAGC CTGCCACGGC GCTTCGTATC GACGACCCCA CCCACATCGG GGTCTACCGT
CTGCGCGGCC GGTTAGGGGT CGGGGGGATG GGCGTGGTCT ACCTCGCCGA GGACCCGCAC
CATCATCCGG TCGCCGTGAA GGTGATCCGC GTAGAGTTCG CCGCCGACCC GGAGTTTCGC
GCCCGGTTCC GCCACGAAGC GGAAGCCGCC CGGCGGGTGC CGCGGTTCTG CACCGCCGCC
TTCCTCGACG CCGACCCCAA CGCCGAACGG CCCTACCTGG TCACCGACTA CGTGCCCGGC
CCGACCCTCG CCCAGGCCGC CCGCCGCCCG TTACGCGGCG CCGAGCTGGA ACAGGTTGCG
GTCCACATCG CAGTGGCGTT GACGGTCATC CACGGCGCCG GAGTCGTCCA CCGCGACCTC
AAACCGTCGA ACGTCATACT CTCGCCCACG GGCGCTCGCG TCATCGACTT CGGCATCGCC
CGCGCCCACG GCATGACCAT GTTCCACATC GACGAGCAGA TCGGCACCCC CGCCTACACG
GCCCCCGAAA ACATCGACGG CGCCCCACCC GATCCGGCCG CCGACATCTT CGCCTGGGGC
GGTGTCGTCC TCTACGCCGC GACCGGCCAA CCCCCCTTCG GGGACCGATC ATCCGAACTA
CTCCTGCACC GCATCCGGTA CGACCATCCC ACCCACCTAA ACCAGCTTCA CGGCCGACTA
CACGACACCG TCACCGCCGC CATGGCCAAA GCCCCCGAGC AGCGGCCGAC CGCCGAGCAG
CTATACCGGA TGCTCACCAG CACCCAACCC CCAACACCGC CCCCCGCCGC ACCCACCCGG
CACGGCAGGC AGGGACCGCA GCCCGCCCCA CCACCACCGG CAATCCCCCC GCACTACGCC
CGGCCCATAC CGCCGGCTCG CCGAACCCGG ATCACGATCC TCGCCACCGC GACCGCCGTG
GTCCTCGCCG CCGCTGTCCT GCTCATCACG GACCGCCCCC GGCACACCCC GACCACGGCG
AACCGCCCCG ACCGGCACGG CGCCGCCGCG ATCCTCGCCG ACCAGGCCAC CACCGATGAT
CCGGATCTCG CGGTCCGTCT CGCCGTCGCC GCCTACCGGC TCAACCCCGA CCCGGCCGCG
CGCATCGCCC TGCTGGCCGC CGCCGCCCGA GGTCTGCCCC CGCTGGCAAC GTTCCGCCAC
AGCGGCAAAA TCCTGTCCGT CGCCATCAGC CCGGACGGGC ACACCCTCGC CACCGGCAGC
GCCGACCACA CCGCACGCCT GTGGAACCCC ACCCACCCCG ACCAGCCGGT AGCCACCCTG
GGCCACGACG ACGGGGTGAA CCACGTGGCG TTCAACCCCG CCGGCACCCT GCTCGCCACC
ACCAGCGACG ACACCACCAT CCGCCTGTGG AACATCACCG ACCCCCACCA CCCCGACCAG
GTCAACACCC TCACCCTGCA CACGGGCGGA ACCCCCTACG GCGCCGCGTT CAACCCCGCC
GGCACCCTGC TCGCGATCAG CACCTCCACC GGCGCCGTGC TCCTAATCGA CATCACCGAC
CCCCGCGCCA CCTCCACCCT CGCCACATTC ACCCCCCACA GCTACATCGC CGGAAACGTG
GCGTTCAGCC CCGACGGCCA CACCCTTGCG ACGGCCAGCC TTGACGGCAC CGCCCGCCTA
TGGGACGTCA CCGACCCGCG CACCCCCCGA CCATTGGCCA CCCTCGCCCC CGGCCCCACC
TTCGACGCCA CCTTCAGCCC CGACGGCACG ATGCTCGCCA CCGCCCAGCA GGACGGCACC
ACCCTCCTGT GGACCCTCAC CACCCCCACC CAGCCGCAGC CCGCCGCCAC CATCCCCGAA
ACCGGCATGA CCACCACCGC CGTCTTCGCC CCCGACGGCA CGACGCTGGC CACCGCCAGC
ACCGACGGCA CCGCCCACCT GTGGGATCTC ACCAACCCGC GCACCCCCCG CCCGCTGGCC
ACCCTCACCG GCCACACCGG ACCCGTGGAA ACCCTCGCCT TCGACGGGAC GATGCTCGCC
ACCGCCGGTG ACGACACCAC CGCCCGCCTG TGGGATCTCA ACCCCACCAG CCTCACCCGC
CGCGCCTGCA CCACCCCCAC CGGCCGACTC AGCGAAGACG AATGGCACCG CTACCTCCCC
ACCTTCCCCT ACCAACCCCC CTGCCCCTAA
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| Protein sequence | MPQPATALRI DDPTHIGVYR LRGRLGVGGM GVVYLAEDPH HHPVAVKVIR VEFAADPEFR
ARFRHEAEAA RRVPRFCTAA FLDADPNAER PYLVTDYVPG PTLAQAARRP LRGAELEQVA
VHIAVALTVI HGAGVVHRDL KPSNVILSPT GARVIDFGIA RAHGMTMFHI DEQIGTPAYT
APENIDGAPP DPAADIFAWG GVVLYAATGQ PPFGDRSSEL LLHRIRYDHP THLNQLHGRL
HDTVTAAMAK APEQRPTAEQ LYRMLTSTQP PTPPPAAPTR HGRQGPQPAP PPPAIPPHYA
RPIPPARRTR ITILATATAV VLAAAVLLIT DRPRHTPTTA NRPDRHGAAA ILADQATTDD
PDLAVRLAVA AYRLNPDPAA RIALLAAAAR GLPPLATFRH SGKILSVAIS PDGHTLATGS
ADHTARLWNP THPDQPVATL GHDDGVNHVA FNPAGTLLAT TSDDTTIRLW NITDPHHPDQ
VNTLTLHTGG TPYGAAFNPA GTLLAISTST GAVLLIDITD PRATSTLATF TPHSYIAGNV
AFSPDGHTLA TASLDGTARL WDVTDPRTPR PLATLAPGPT FDATFSPDGT MLATAQQDGT
TLLWTLTTPT QPQPAATIPE TGMTTTAVFA PDGTTLATAS TDGTAHLWDL TNPRTPRPLA
TLTGHTGPVE TLAFDGTMLA TAGDDTTARL WDLNPTSLTR RACTTPTGRL SEDEWHRYLP
TFPYQPPCP
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