Gene Francci3_3365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3365 
Symbol 
ID3905947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand- 
Start bp3994121 
End bp3994861 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content65% 
IMG OID637880688 
Producthypothetical protein 
Protein accessionYP_482449 
Protein GI86742049 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.668804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.0254427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACGC CCGACCGTAT AGAAAACGCC ACCTACCACG ACCAGGATCG TGCTCGGAGA 
ATCTACGGCG AGGCCTTCCG AGCCACCTTC GAGTACGTCT ACGGGTGCCA CATCCCCGGT 
GCGGTGGCGG AGTTCGGCTG CTTCCAGGGA TTCAGCTCGC TGCTCCTGGC CGATCTCCTC 
GTGGAGTTCA ACGCCATGCA CGAATTCTAC GACGTCCTGC ATCCCCGGAA TCTGTACCTG 
TACGACTCCT TCGCGGGCTT CCCCAAGAGC GTCGATCCGG TGGACGTCGC CTCCTACGAG 
GTCGCCGACA CCGGTTACTG GCGCGAATCG GAGGACGCGG CCCCACCCGG CACCGAGGAG 
ATGCTGCGCC GGGAGTTCAC CGCCCGTTTC GGCGACCGGG ACTGGACCGT CGTGCGCGGG 
ATGTACGAGG AGACGTTGCT GTCCACACCC ATCACCCGCC CGGTGGCCAT CGCCAACCTG 
GACTGCGACC TCTACGCGTC CACGTCCCAG GTGCTCGACC ACCTGTTGAC CCACCGGTTG 
ATGCCCGACG GTGCGGTGCT GCTGATGGAC GACTACAACT GCAACCGCGC GAATCCCCGG 
TTCGGAATGC GACGGGCCAT GCGCGAGTGT TTCGCCCGCA CCGACGGGTT CTACGACTAC 
AGCGAGTTCC TGCGCTATGG ATGGCACGGT CGCGCGTTCT TCGTCCACCG GCTGGGCGAC 
AGCCCGAATC CGGACGCATG A
 
Protein sequence
MPTPDRIENA TYHDQDRARR IYGEAFRATF EYVYGCHIPG AVAEFGCFQG FSSLLLADLL 
VEFNAMHEFY DVLHPRNLYL YDSFAGFPKS VDPVDVASYE VADTGYWRES EDAAPPGTEE 
MLRREFTARF GDRDWTVVRG MYEETLLSTP ITRPVAIANL DCDLYASTSQ VLDHLLTHRL 
MPDGAVLLMD DYNCNRANPR FGMRRAMREC FARTDGFYDY SEFLRYGWHG RAFFVHRLGD 
SPNPDA