| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3357 |
|---|
| Symbol | |
|---|
| ID | 3905939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3981282 |
|---|
| End bp | 3982436 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637880680 |
|---|
| Product | radical SAM family protein |
|---|
| Protein accession | YP_482441 |
|---|
| Protein GI | 86742041 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.158709 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0575022 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCCCG AGCGCATCAG TCCCGACCCG AGATGGTTGC AGGAGAAAAA ATGGTGGACG
TTTCGCTCCC CGCTGGCTAC CGTGCCAAAG GAGAAGGACG TGCTTCGGGT GGACCGACGT
GGGGGGGCAA TGACACGGAG CGCCAATGAC ACGGGGGCCA AGAATGACGT GGGGGCCGAT
GTGGCCGGCG GCATCGCGAT CTGGGACCGT TTCCCCCCGA CCCAGAGAAT GGTCATCAAC
TACACTCTGA CCTGCAATCT TGCGTGCGAT CACTGCATTG TGGAGTCGAA TCCGACCCGC
CGGGAGCGGC TGACCCTCGA CGAGGTCCGG TCCGTACTCG AGCAGGGGCA GCGCACCGGG
AAGCGACACG TCACCTTCAG CGGGGGCGAG GTCTTCCTCT ACCCACAGGT CATGTGCCAG
GCCATCGCCC ACGGCGTCCG GCTCGGCTAT GTCGTCGACG TGGAGTCCAA CGCCTTCTGG
GCCCGCAACC CCGCCCAGGC CGAGGCCAGA CTGCGGCCCT TCGTCGAGGC CGGCATCCAC
GGCCTGTCCC TCAGCGCGGA CGTCCACCAC ATGCGGTACT TCCCCGTGGA GCGACCGATC
AACGCCGCCC GGGCGGCCCG GGCCAGCGGC CTGGCCACCG AGATCCAGTT CTGCACCTCG
GCCGACGAAC AGGCCGACGA GCAGATCAGG GCGGCCCTGA TCGCGGCCGG CGAGCCGTTC
GTGGTGCTCG AGCTGCTCGA TCGGGGCCGC GCCCGGGAGA TGCACCGGAT CTGGCGGGGA
CGTCCGGTCA CCGAGCTGCC CGACTGCGAC GATCTGACCA CCACCGTGCA CGCCACCGGT
GACGCCTATG CATGCTGCCA GCTCGACATC GGCGTCGACG ACATGAAGCG GACGCCGGTG
TTCCTGGGGC CCGTGCGCGG CCCGGGATCG GACCCGGCGG AGCAGGCCCG GCGGGAACGG
CTCGTGCACG CCTTCCACGA CCCGCAGTCC CCAGCCTACT TCCGGACCAT GGTCGCCGAG
GATCCGCAGT TCCAGGACCT CGCCGACGCG CGGTTCACCA ACATCTGCGA TTTCTGCCTG
CGGGCCCTGA GCGACCCGGC CCGGGTGGCG GCCCTGGAAC GGGTGCTCGC CCGGGCCGGA
CGGACCGCGT GCTGA
|
|---|
| Protein sequence | MMPERISPDP RWLQEKKWWT FRSPLATVPK EKDVLRVDRR GGAMTRSAND TGAKNDVGAD
VAGGIAIWDR FPPTQRMVIN YTLTCNLACD HCIVESNPTR RERLTLDEVR SVLEQGQRTG
KRHVTFSGGE VFLYPQVMCQ AIAHGVRLGY VVDVESNAFW ARNPAQAEAR LRPFVEAGIH
GLSLSADVHH MRYFPVERPI NAARAARASG LATEIQFCTS ADEQADEQIR AALIAAGEPF
VVLELLDRGR AREMHRIWRG RPVTELPDCD DLTTTVHATG DAYACCQLDI GVDDMKRTPV
FLGPVRGPGS DPAEQARRER LVHAFHDPQS PAYFRTMVAE DPQFQDLADA RFTNICDFCL
RALSDPARVA ALERVLARAG RTAC
|
|---|
| |